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相关论文: Explicit Integration with GPU Acceleration for Lar…

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Matrix multiplication is a foundational operation in scientific computing and machine learning, yet its computational complexity makes it a significant bottleneck for large-scale applications. The shift to parallel architectures, primarily…

分布式、并行与集群计算 · 计算机科学 2025-07-30 Mufakir Qamar Ansari , Mudabir Qamar Ansari

Large scale-free graphs are famously difficult to process efficiently: the skewed vertex degree distribution makes it difficult to obtain balanced partitioning. Our research instead aims to turn this into an advantage by partitioning the…

分布式、并行与集群计算 · 计算机科学 2015-10-05 Scott Sallinen , Abdullah Gharaibeh , Matei Ripeanu

We present the GPU version of DeePMD-kit, which, upon training a deep neural network model using ab initio data, can drive extremely large-scale molecular dynamics (MD) simulation with ab initio accuracy. Our tests show that the GPU version…

计算物理 · 物理学 2020-10-28 Denghui Lu , Han Wang , Mohan Chen , Jiduan Liu , Lin Lin , Roberto Car , Weinan E , Weile Jia , Linfeng Zhang

A Multigrid Full Approximation Storage algorithm for solving Deep Residual Networks is developed to enable neural network parallelized layer-wise training and concurrent computational kernel execution on GPUs. This work demonstrates a 10.2x…

机器学习 · 计算机科学 2020-09-01 Andrew C. Kirby , Siddharth Samsi , Michael Jones , Albert Reuther , Jeremy Kepner , Vijay Gadepally

We leverage physics-embedded differentiable graph network simulators (GNS) to accelerate particulate and fluid simulations to solve forward and inverse problems. GNS represents the domain as a graph with particles as nodes and learned…

地球物理 · 物理学 2023-09-26 Krishna Kumar , Yongjin Choi

This paper presents a spectral element finite element scheme that efficiently solves elliptic problems on unstructured hexahedral meshes. The discrete equations are solved using a matrix-free preconditioned conjugate gradient algorithm. An…

计算工程、金融与科学 · 计算机科学 2016-09-21 J. -F. Remacle , R. Gandham , T. Warburton

The task of integrating a large number of independent ODE systems arises in various scientific and engineering areas. For nonstiff systems, common explicit integration algorithms can be used on GPUs, where individual GPU threads…

数学软件 · 计算机科学 2016-11-09 Kyle E Niemeyer , Chih-Jen Sung

Many mission-critical systems are based on GPU for inference. It requires not only high recognition accuracy but also low latency in responding time. Although many studies are devoted to optimizing the structure of deep models for efficient…

计算机视觉与模式识别 · 计算机科学 2020-08-13 Ming Lin , Hesen Chen , Xiuyu Sun , Qi Qian , Hao Li , Rong Jin

Numerical radiation-hydrodynamics (RHD) for non-relativistic flows is a challenging problem because it encompasses processes acting over a very broad range of timescales, and where the relative importance of these processes often varies by…

天体物理仪器与方法 · 物理学 2024-07-29 Chong-Chong He , Benjamin D. Wibking , Mark R. Krumholz

Usage of GPUs as co-processors is a well-established approach to accelerate costly algorithms operating on matrices and vectors. We aim to further improve the performance of the Global Neutrino Analysis framework (GNA) by adding GPU support…

分布式、并行与集群计算 · 计算机科学 2018-04-23 Anna Fatkina , Maxim Gonchar , Liudmila Kolupaeva , Dmitry Naumov , Konstantin Treskov

The complex regulatory dynamics of a biological network can be succinctly captured using discrete logic models. Given even sparse time-course data from the system of interest, previous work has shown that global optimization schemes are…

分子网络 · 定量生物学 2026-04-22 Joyce Reimer , Pranta Saha , Chris Chen , Neeraj Dhar , Brook Byrns , Steven Rayan , Gordon Broderick

We report a novel approach for the efficient computation of solutions of a broad class of large-scale systems of non-linear ordinary differential equations, describing aggregation kinetics. The method is based on a new take on the…

数值分析 · 数学 2023-12-14 Dmitrii Lukashevich , Ivan Tyukin , Nikolay Brilliantov

We present the GPU calculation with the common unified device architecture (CUDA) for the Wolff single-cluster algorithm of the Ising model. Proposing an algorithm for a quasi-block synchronization, we realize the Wolff single-cluster Monte…

计算物理 · 物理学 2012-01-10 Yukihiro Komura , Yutaka Okabe

Parallel computing can offer an enormous advantage regarding the performance for very large applications in almost any field: scientific computing, computer vision, databases, data mining, and economics. GPUs are high performance many-core…

分布式、并行与集群计算 · 计算机科学 2015-11-24 Bogdan Oancea , Tudorel Andrei , Raluca Mariana Dragoescu

Graph neural networks (GNNs) have recently exploded in popularity thanks to their broad applicability to graph-related problems such as quantum chemistry, drug discovery, and high energy physics. However, meeting demand for novel GNN models…

分布式、并行与集群计算 · 计算机科学 2022-10-20 Rishov Sarkar , Stefan Abi-Karam , Yuqi He , Lakshmi Sathidevi , Cong Hao

The increasing scale and wealth of inter-connected data, such as those accrued by social network applications, demand the design of new techniques and platforms to efficiently derive actionable knowledge from large-scale graphs. However,…

分布式、并行与集群计算 · 计算机科学 2014-12-08 Abdullah Gharaibeh , Tahsin Reza , Elizeu Santos-Neto , Lauro Beltrao Costa , Scott Sallinen , Matei Ripeanu

This paper proposes a versatile high-performance execution model, inspired by systolic arrays, for memory-bound regular kernels running on CUDA-enabled GPUs. We formulate a systolic model that shifts partial sums by CUDA warp primitives for…

分布式、并行与集群计算 · 计算机科学 2019-09-09 Peng Chen , Mohamed Wahib , Shinichiro Takizawa , Ryousei Takano , Satoshi Matsuoka

This paper presents the implementation of a HLLC finite volume solver using GPU technology for the solution of shallow water problems in two dimensions. It compares both CPU and GPU approaches for implementing all the solver's steps. The…

计算工程、金融与科学 · 计算机科学 2018-07-03 Fabrice Zaoui

Large industrial systems that combine services and applications, have become targets for cyber criminals and are challenging from the security, monitoring and auditing perspectives. Security log analysis is a key step for uncovering…

分布式、并行与集群计算 · 计算机科学 2017-04-10 Xavier Bellekens , Christos Tachtatzis , Robert Atkinson , Craig Renfrew , Tony Kirkham

A high fidelity flow simulation for complex geometries for high Reynolds number ($Re$) flow is still very challenging, which requires more powerful computational capability of HPC system. However, the development of HPC with traditional CPU…

计算物理 · 物理学 2022-03-03 Chuangchao Ye , Pengjunyi Zhang , Rui Yan , Dejun Sun , Zhenhua Wan