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Computational models have become one of the prevalent methods to model complex phenomena. To accurately model complex interactions, such as detailed biomolecular interactions, scientists often rely on multiscale models comprised of several…

Advances in high-throughput simulation (HTS) software enabled computational databases and big data to become common resources in materials science. However, while computational power is increasingly larger, software packages orchestrating…

计算物理 · 物理学 2023-12-22 Daniel Schwalbe-Koda

Modern large-scale scientific discovery requires multidisciplinary collaboration across diverse computing facilities, including High Performance Computing (HPC) machines and the Edge-to-Cloud continuum. Integrated data analysis plays a…

分布式、并行与集群计算 · 计算机科学 2023-08-21 Renan Souza , Tyler J. Skluzacek , Sean R. Wilkinson , Maxim Ziatdinov , Rafael Ferreira da Silva

We describe the development of a scientific cloud computing (SCC) platform that offers high performance computation capability. The platform consists of a scientific virtual machine prototype containing a UNIX operating system and several…

计算物理 · 物理学 2013-12-02 Kevin Jorissen , Fernando D. Vila , John J. Rehr

Advances in technology and computing hardware are enabling scientists from all areas of science to produce massive amounts of data using large-scale simulations or observational facilities. In this era of data deluge, effective coordination…

数据库 · 计算机科学 2015-03-31 Spyros Blanas , Surendra Byna

The heterogeneous edge-cloud computing paradigm can provide a more optimal direction to deploy scientific workflows than traditional distributed computing or cloud computing environments. Due to the different sizes of scientific datasets…

分布式、并行与集群计算 · 计算机科学 2021-04-14 Xin Du , Songtao Tang , Zhihui Lu , Keke Gai , Jie Wu , Patrick C. K. Hung

Influenced by the advances in data and computing, the scientific practice increasingly involves machine learning and artificial intelligence driven methods which requires specialized capabilities at the system-, science- and service-level…

Critical goals of scientific computing are to increase scientific rigor, reproducibility, and transparency while keeping up with ever-increasing computational demands. This work presents an integrated framework well-suited for data…

分布式、并行与集群计算 · 计算机科学 2023-10-13 Paul Nuyujukian

The connect-fill-run workflow paradigm, widely adopted in mature software engineering, accelerates collaborative development. However, computational chemistry, computational materials science, and computational biology face persistent…

化学物理 · 物理学 2025-08-12 Jianan Wang , Wenbo Guo , Xin Yue , Minjie Xu , Yueqiang Zheng , Jingxiang Dong , Jiarui Hu , Jian Xia , Chuixiong Wu

To retrieve and compare scientific data of simulations and experiments in materials science, data needs to be easily accessible and machine readable to qualify and quantify various materials science phenomena. The recent progress in open…

材料科学 · 物理学 2025-03-25 Balduin Katzer , Steffen Klinder , Katrin Schulz

High-Performance Computing (HPC) centers and cloud providers support an increasingly diverse set of applications on heterogenous hardware. As Artificial Intelligence (AI) and Machine Learning (ML) workloads have become an increasingly…

This paper aims to create a transition path from file-based IO to streaming-based workflows for scientific applications in an HPC environment. By using the openPMP-api, traditional workflows limited by filesystem bottlenecks can be overcome…

Compared to traditional distributed computing environments such as grids, cloud computing provides a more cost-effective way to deploy scientific workflows. Each task of a scientific workflow requires several large datasets that are located…

分布式、并行与集群计算 · 计算机科学 2019-01-25 Bing Lin , Fangning Zhu , Jianshan Zhang , Jiaqing Chen , Xing Chen , Neal N. Xiong , Jaime Lloret Mauri

This paper targets the execution of data science (DS) pipelines supported by data processing, transmission and sharing across several resources executing greedy processes. Current data science pipelines environments provide various…

分布式、并行与集群计算 · 计算机科学 2021-08-21 Genoveva Vargas-Solar , Ali Akoglu , Md Sahil Hassan

Scientific workflow has become essential in software engineering because it provides a structured approach to designing, executing, and analyzing scientific experiments. Software developers and researchers have developed hundreds of…

软件工程 · 计算机科学 2023-09-15 Khairul Alam , Banani Roy , Alexander Serebrenik

The modeling of physical processes is an integral part of scientific and technical research. In this area, the Extendible C++ Application in Quantum Technologies (ECAQT) package provides the numerical simulations and modeling of complex…

计算物理 · 物理学 2013-01-10 H. V. Astsatryan , T. V. Gevorgyan , A. R. Shahinyan

Scientific computing applications usually need huge amounts of computational power. The cloud provides interesting high-performance computing solutions, with its promise of virtually infinite resources on demand. However, migrating…

分布式、并行与集群计算 · 计算机科学 2015-11-26 Satish Narayana Srirama , Pelle Jakovits , Vladislav Ivaništšev

Coupled models are set to become increasingly important in all aspects of science and engineering as tools with which to study complex systems in an integrated manner. Such coupled, hybrid simulations typically communicate data between the…

计算物理 · 物理学 2009-11-11 P. V. Coveney , G. De Fabritiis , M. J. Harvey , S. M. Pickles , A. R. Porter

Computer-based scientific experiments are becoming increasingly data-intensive, necessitating the use of High-Performance Computing (HPC) clusters to handle large scientific workflows. These workflows result in complex data and control…

数据库 · 计算机科学 2025-02-17 Zahra Sadeghibogar , Alessandro Berti , Marco Pegoraro , Wil M. P. van der Aalst