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Various regimes of a charge motion along a chain in a constant electric field are investigated. This motion is simulated on the basis of the Holstein model. Earlier studies demonstrate a possibility of a uniform motion of a charge in a…

介观与纳米尺度物理 · 物理学 2021-12-21 A. N. Korshunova , V. D. Lakhno

A charge motion in an electric field in a Holstein molecular chain is modeled in the absence of dissipation. It is shown that in a weak electric field a Holstein polaron moves uniformly experiencing small oscillations of its shape. These…

介观与纳米尺度物理 · 物理学 2013-04-04 V. D. Lakhno , A. N. Korshunova

In this work, we consider the motion of a polaron in a polynucleotide Holstein molecular chain in a constant electric field. It is shown that the character of the polaron motion in the chain depends not only on the chosen parameters of the…

统计力学 · 物理学 2022-01-26 A. N. Korshunova , V. D. Lakhno

By resorting to a model inspired to the standard Davydov and Holstein-Fr\"ohlich models, in the present paper we study the motion of an electron along a chain of heavy particles modelling a sequence of nucleotides proper to a DNA fragment.…

生物物理 · 物理学 2021-08-17 Elham Faraji , Roberto Franzosi , Stefano Mancini , Marco Pettini

Recent experimental evidence shows that the pi-orbitals along the stacking of base pairs can facilitate the long-range charge transfer in DNA. Proton motion in the base pair hydrogen bonds has also been found to affect the transfer rate. To…

材料科学 · 物理学 2009-11-10 Chun-Min Chang , A. H. Castro Neto , A. R. Bishop

The question of whether DNA conducts electric charges is intriguing to physicists and biologists alike. The suggestion that electron transfer/transport in DNA might be biologically important has triggered a series of experimental and…

无序系统与神经网络 · 物理学 2020-05-04 H. Wang , R. Marsh , J. P. Lewis , R. A. Roemer

Numerous experiments on charge transfer in DNA yield a contradictory picture of the transfer: on the one hand they suggest that it is a very slow process and the charge is almost completely localized on one Watson-Crick pair, but on the…

生物物理 · 物理学 2013-04-22 V. D. Lakhno , V. B. Sultanov

We study the electronic properties of DNA by way of a tight-binding model applied to four particular DNA sequences. The charge transfer properties are presented in terms of localisation lengths, crudely speaking the length over which…

基因组学 · 定量生物学 2007-05-23 Daphne Klotsa , Rudolf A. Roemer , Matthew S. Turner

We study the propagation of very large amplitude localized excitations in a model of DNA that takes explicitly into account the helicoidal structure. These excitations represent the ``transcription bubble'', where the hydrogen bonds between…

软凝聚态物质 · 物理学 2009-10-31 Alessandro Campa

Various charge migration mechanisms in the DNA are studied within the framework of the Peyrard-Bishop-Holstein model which has been widely used to address charge dynamics in this macromolecule. To analyze these mechanisms we consider…

生物物理 · 物理学 2022-09-14 R. P. A. Lima , A. V. Malyshev

Quantum transport for DNA conduction has widely studied with interest in application as a candidate in making nanowires as well as interest in the scientific mechanism. In this paper, we review recent works with concerning the electronic…

无序系统与神经网络 · 物理学 2015-03-13 Hiroaki Yamada , Kazumoto Iguchi

Charge transfer in a DNA duplex chain is studied by constructing a system with virtual electrodes connected at the ends of each DNA strand. The systeym is described by the tight-binding model and its transport is analyzed by the transfer…

介观与纳米尺度物理 · 物理学 2009-11-11 X. F. Wang , Tapash Chakraborty

Charge migration along DNA molecules has attracted scientific interest for over half a century. Reports on possible high rates of charge transfer between donor and acceptor through the DNA, obtained in the last decade from solution…

材料科学 · 物理学 2009-11-10 Danny Porath , Gianaurelio Cuniberti , Rosa Di Felice

We study the electronic transport through short DNA chains with various sequences of base pairs between voltage-biased leads. The strong coupling of the charge carriers to local vibrations of the base pairs leads to the formation of…

介观与纳米尺度物理 · 物理学 2009-11-13 Benjamin B. Schmidt , Matthias H. Hettler , Gerd Schön

We present a very simple model for the study of charge transport in a molecule patterned on B-DNA. In this model we use a discrete non-linear Schr\"{o}dinger equation to describe electrons propagating along the sugar-phosphate backbone of…

软凝聚态物质 · 物理学 2009-11-10 Niels R. Walet , Wojtek J. Zakrzewski

The rapid progress in the field of molecular electronics has led to an increasing interest on DNA oligomers as possible components of electronic circuits at the nanoscale. For this, however, an understanding of charge transfer and transport…

软凝聚态物质 · 物理学 2007-05-23 R. Gutierrez , G. Cuniberti

We describe a variational method to solve the Holstein model for an electron coupled to dynamical, quantum phonons on an infinite lattice. The variational space can be systematically expanded to achieve high accuracy with modest…

强关联电子 · 物理学 2009-10-31 J. Bonca , S. A. Trugman , I. Batistic

We study the propagation of $\alpha$-helix polarons in a model describing the non-adiabatic interaction between an electron and a lattice of quantum mechanical oscillators at physiological temperature. We show that when excited by a…

其他凝聚态物理 · 物理学 2018-07-16 Jingxi Luo , Bernard M. A. G. Piette

The complex mechanisms governing charge migration in DNA oligomers reflect the rich structural and electronic properties of the molecule of life. Controlling the mechanical stability of DNA nanowires in charge transport experiments is a…

介观与纳米尺度物理 · 物理学 2015-05-13 Bo Song , Marcus Elstner , Gianaurelio Cuniberti

We examine spin excitation or polarization transfer via long-range interacting spin chains with diagonal and off-diagonal disorder. To this end, we determine the mean localization length of the single-excitation eigenstates of the chain for…

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