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We consider a general growth mechanism, which acts at cellular level and above (organs, systems and whole organisms). Using its mathematical representation, the growth equation, we study the growth and division mechanisms of amoeba and…

其他定量生物学 · 定量生物学 2016-10-06 Yuri K. Shestopaloff

To insight the relationships between the self-organizing structures of cells, such as the cell clusters, and the properties of biotissues is helpful in revealing the function and designing biomaterial. Traditional random foam model neglects…

软凝聚态物质 · 物理学 2017-06-07 Xiaohua Zhou , Erhu Zhang , Minggang Xia , Jianlin Liu , Shengli Zhang

We present the results of an attempt to adapt the distribution function formalism to characterize large-scale structures like clusters of galaxies that form in a cosmological N-body simulation. While galaxy clusters are systems that are not…

天体物理学 · 物理学 2015-06-24 Priyamvada Natarajan , Jens Hjorth , Eelco van Kampen

Through extensive studies of dynamical system modeling cellular growth and reproduction, we find evidence that complexity arises in multicellular organisms naturally through evolution. Without any elaborate control mechanism, these systems…

适应与自组织系统 · 物理学 2009-10-31 Chikara Furusawa , Kunihiko Kaneko

In hierarchical cosmologies the evolution of galaxy clustering depends both on cosmological quantities such as Omega and Lambda, which determine how dark matter halos form and evolve, and on the physical processes - cooling, star formation…

天体物理学 · 物理学 2009-09-25 Guinevere Kauffmann , Joerg M. Colberg , Antonaldo Diaferio , Simon D. M. White

Self-similar evolution is widely used in the theory of collisional stellar dynamics, but its applicability to systems with multiple stellar masses is not well established. We investigate the structural stability of self-similar evolution in…

星系天体物理 · 物理学 2026-04-01 Václav Pavlík

Evolutionary transitions occur when previously-independent replicating entities unite to form more complex individuals. Such transitions have profoundly shaped natural evolutionary history and occur in two forms: fraternal transitions…

种群与进化 · 定量生物学 2023-10-10 Matthew Andres Moreno , Charles Ofria

We consider a class of biologically-motivated stochastic processes in which a unicellular organism divides its resources (volume or damaged proteins, in particular) symmetrically or asymmetrically between its progeny. Assuming the final…

定量方法 · 定量生物学 2016-07-20 Andrew Marantan , Ariel Amir

The evolution of various competing cell types in tissues, and the resulting persistent tissue population, is studied numerically and analytically in a particle-based model of active tissues. Mutations change the properties of cells in…

种群与进化 · 定量生物学 2024-06-03 Tobias Büscher , Nirmalendu Ganai , Gerhard Gompper , Jens Elgeti

Rapid advance of experimental techniques provides an unprecedented in-depth view into complex developmental processes. Still, little is known on how the complexity of multicellular organisms evolved by elaborating developmental programs and…

分子网络 · 定量生物学 2021-07-16 Somya Mani , Tsvi Tlusty

The evolution of structure in biology is driven by accretion and change. Accretion brings together disparate parts to form bigger wholes. Change provides opportunities for growth and innovation. Here we review patterns and processes that…

其他定量生物学 · 定量生物学 2019-01-16 Derek Caetano-Anollés , Kelsey Caetano-Anollés , Gustavo Caetano-Anollés

A central and long-standing issue in evolutionary theory is the origin of the biological variation upon which natural selection acts1. Some hypotheses suggest that evolutionary change represents an adaptation to the surrounding environment…

统计力学 · 物理学 2007-05-23 J. Podani , Z. N. Oltvai , H. Jeong , B. Tombor , A. -L. Barabasi , E. Szathmary

We explore the morphological and dynamical evolution of galaxy clusters in simulations using scalar and vector-valued Minkowski valuations and the concept of fundamental plane relations. In this context, three questions are of fundamental…

天体物理学 · 物理学 2009-07-07 C. Beisbart , R. Valdarnini , T. Buchert

An evolving yeast colony is simulated by means of a cellular automaton that takes care of many important features of the system under study. A complete survey of the properties of the colony is done and a set of scaling relations is found,…

统计力学 · 物理学 2007-05-23 Lorenzo Fortunato

In nearby clusters early-type galaxies follow isotropic orbits, while the orbits of late-type galaxies are characterized by slightly radial anisotropy. Little is known about the orbits of the different populations of cluster galaxies at…

宇宙学与河外天体物理 · 物理学 2015-05-13 A. Biviano , B. M. Poggianti

Deep clustering outperforms conventional clustering by mutually promoting representation learning and cluster assignment. However, most existing deep clustering methods suffer from two major drawbacks. First, most cluster assignment methods…

计算机视觉与模式识别 · 计算机科学 2022-02-23 Hanxuan Wang , Na Lu , Qinyang Liu

Gene regulatory networks constitute the first layer of the cellular computation for cell adaptation and surveillance. In these webs, a set of causal relations is built up from thousands of interactions between transcription factors and…

分子网络 · 定量生物学 2009-11-30 Carlos Rodriguez-Caso , Bernat Corominas-Murtra , Ricard V. Solé

Our knowledge of how individual cells self-organize to form complex multicellular systems is being revolutionized by a data outburst, coming from high-throughput experimental breakthroughs such as single-cell RNA sequencing and spatially…

细胞行为 · 定量生物学 2021-04-20 Gabriel Torregrosa , Jordi Garcia-Ojalvo

Mutualistic interactions benefit both partners, promoting coexistence and genetic diversity. Spatial structure can promote cooperation, but spatial expansions may also make it hard for mutualistic partners to stay together, since genetic…

种群与进化 · 定量生物学 2014-02-26 Melanie JI Muller , Beverly I Neugeboren , David R Nelson , Andrew W Murray

The evolution of multicellular organisms from monocellular ancestors represents one of the greatest advances of the history of life. The assembly of such multicellular organisms requires signalling and response between cells: over millions…

细胞行为 · 定量生物学 2007-05-23 Graeme J. Ackland , Richard D. L. Hanes , Morrel H. Cohen