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Active fluctuations are known to play a significant role in the intracellular transport of passive objects. However, the effect of viscoelasticity of the environment in shaping such processes is relatively less understood. Here, with a…

统计力学 · 物理学 2023-09-26 Biswajit Das , Shuvojit Paul , Sreekanth K. Manikandan , Ayan Banerjee

Molecular motors power directed transport of cargoes within cells. Even if a single motor is sufficient to transport a cargo, motors often cooperate in small teams. We discuss the cooperative cargo transport by several motors theoretically…

亚细胞过程 · 定量生物学 2007-05-23 Stefan Klumpp , Melanie J. I. Muller , Reinhard Lipowsky

This fluid dynamics video presents three-dimensional kinetic simulations of the dynamics in suspensions of oxytactic bacteria confined in thin liquid film surrounded by air. At the initial time, the bacterial concentration is uniform and…

流体动力学 · 物理学 2011-10-17 Barath Ezhilan , Amir Alizadeh Pahlavan , David Saintillan

Self-propelled colloidal objects, such as motile bacteria or synthetic microswimmers, have microscopically irreversible individual dynamics - a feature they share with all living systems. The incoherent behaviour of individual swimmers can…

软凝聚态物质 · 物理学 2016-04-06 J. Stenhammar , R. Wittkowski , D. Marenduzzo , M. E. Cates

The sedimentation process in a suspension of bacteria is the result of the competition between gravity and the intrinsic motion of the microorganisms. We perform simulations of run-and-tumble "squirmers" that move in a fluid medium,…

软凝聚态物质 · 物理学 2021-11-11 Andrea Scagliarini , Ignacio Pagonabarraga

The collective motion of microswimmers in suspensions induce patterns of vortices on scales that are much larger than the characteristic size of a microswimmer, attaining a state called bacterial turbulence. Hydrodynamic turbulence acts on…

流体动力学 · 物理学 2019-08-02 Moritz Linkmann , Guido Boffetta , M. Cristina Marchetti , Bruno Eckhardt

Biased locomotion is a common feature of microorganisms, but little is known about its impact on self-organisation. Inspired by recent experiments showing a transition to large-scale flows, we study theoretically the dynamics of…

软凝聚态物质 · 物理学 2023-12-07 Albane Théry , Alexander Chamolly , Eric Lauga

Experiments have recently shown the feasibility of utilising bacteria as micro-scale robotic devices, with special attention paid to the development of bacteria-driven micro-swimmers taking advantage of built-in actuation and sensing…

软凝聚态物质 · 物理学 2019-02-14 Christian Esparza Lopez , Albane Thery , Eric Lauga

Peritrichously-flagellated bacteria, such as Escherichia coli, self-propel in fluids by using specialised motors to rotate multiple helical filaments. The rotation of each motor is transmitted to a short flexible segment called the hook…

生物物理 · 物理学 2018-06-07 Emily E. Riley , Debasish Das , Eric Lauga

The mechanism of propulsion of host bacteria under the action of actin gel networks is examined by means of a continuum model of the dynamics of F-actin concentration. The model includes the elasticity of the network, its attachment to the…

细胞行为 · 定量生物学 2007-05-23 V. G. Benza

We examine the angular momentum transport properties of disks composed of macroscopic particles whose velocity dispersions are externally enhanced (``stirred''). Our simple Boltzmann equation model serves as an analogy for unmagnetized…

天体物理学 · 物理学 2009-10-31 Eliot Quataert , Eugene I. Chiang

Active fluids composed of constituents that are constantly driven away from thermal equilibrium can support spontaneous currents and can be engineered to have unconventional transport properties. Here we report the emergence of…

软凝聚态物质 · 物理学 2025-05-15 Frank Siebers , Robin Bebon , Ashreya Jayaram , Thomas Speck

In this letter, we show that pore-scale diffusiophoresis of colloidal particles along local salt gradients manifests in the macroscopic dispersion of particles in a porous medium. Despite is transient character, this microscopic phenomenon…

软凝聚态物质 · 物理学 2023-03-16 Mamta Jotkar , Pietro de Anna , Marco Dentz , Luis Cueto-Felgueroso

Bacterial cellulose biofilms are complex networks of strong interwoven nanofibers that control transport and protect bacterial colonies in the film. Design of diverse applications of bacterial cellulose films also relies on understanding…

软凝聚态物质 · 物理学 2022-06-09 Firoozeh Babayekhorasani , Maryam Hosseini , Patrick T. Spicer

Understanding mixing and transport of passive scalars in active fluids is important to many natural (e.g. algal blooms) and industrial (e.g. biofuel, vaccine production) processes. Here, we study the mixing of a passive scalar (dye) in…

We discuss a theoretical model for bidirectional cargo transport in biological cells, which is driven by teams of molecular motors and subject to thermal fluctuations. The model describes explicitly the directed motion of the molecular…

生物物理 · 物理学 2017-09-20 Sarah Klein , Cécile Appert-Rolland , Ludger Santen

Biological functionality of cellular aggregates is largely influenced by the activity and displacements of individual constituent cells. From a theoretical perspective this activity can be characterized by hydrodynamic transport…

软凝聚态物质 · 物理学 2025-07-31 Subhadip Chakraborti , Vasily Zaburdaev

{\it E. coli} bacteria swim in straight runs interrupted by sudden reorientation events called tumbles. The resulting random walks give rise to density fluctuations that can be derived analytically in the limit of non interacting particles…

统计力学 · 物理学 2013-09-05 M. Paoluzzi , R. Di Leonardo , L. Angelani

On the basis of a model we capture the role of strong attractive interaction in suppressing the rotational degrees of freedom of the system and volume exclusion in keeping microscopic symmetry-breaking intact to result in super-diffusive…

细胞行为 · 定量生物学 2015-05-13 A. Bhattacharyay

We report a novel form of convection in suspensions of the bioluminiscent marine bacterium $Photobacterium~phosphoreum$. Suspensions of these bacteria placed in a chamber open to the air create persistent luminiscent plumes most easily…

软凝聚态物质 · 物理学 2019-01-02 Jocelyn Dunstan , Kyoung J. Lee , Simon F. Park , Yongyun Hwang , Raymond E. Goldstein