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Distances are pervasive in machine learning. They serve as similarity measures, loss functions, and learning targets; it is said that a good distance measure solves a task. When defining distances, the triangle inequality has proven to be a…

机器学习 · 计算机科学 2020-07-08 Silviu Pitis , Harris Chan , Kiarash Jamali , Jimmy Ba

Distribution function is essential in statistical inference, and connected with samples to form a directed closed loop by the correspondence theorem in measure theory and the Glivenko-Cantelli and Donsker properties. This connection creates…

统计方法学 · 统计学 2024-04-02 Xueqin Wang , Jin Zhu , Wenliang Pan , Junhao Zhu , Heping Zhang

The mutual information between stimulus and spike-train response is commonly used to monitor neural coding efficiency, but neuronal computation broadly conceived requires more refined and targeted information measures of input-output joint…

神经元与认知 · 定量生物学 2015-04-21 Sarah E. Marzen , Michael R. DeWeese , James P. Crutchfield

Fitting network models to neural activity is an important tool in neuroscience. A popular approach is to model a brain area with a probabilistic recurrent spiking network whose parameters maximize the likelihood of the recorded activity.…

机器学习 · 统计学 2021-11-16 Guillaume Bellec , Shuqi Wang , Alireza Modirshanechi , Johanni Brea , Wulfram Gerstner

We consider the evolution of a network of neurons, focusing on the asymptotic behavior of spikes dynamics instead of membrane potential dynamics. The spike response is not sought as a deterministic response in this context, but as a…

数据分析、统计与概率 · 物理学 2010-08-27 J. C. Vasquez , B. Cessac , T. Viéville

As synchronized activity is associated with basic brain functions and pathological states, spike train synchrony has become an important measure to analyze experimental neuronal data. Many different measures of spike train synchrony have…

Network data is a major object data type that has been widely collected or derived from common sources such as brain imaging. Such data contains numeric, topological, and geometrical information, and may be necessarily considered in certain…

统计方法学 · 统计学 2021-06-29 Han Feng , Xing Qiu , Hongyu Miao

Spanners for metric spaces have been extensively studied, both in general metrics and in restricted classes, perhaps most notably in low-dimensional Euclidean spaces -- due to their numerous applications. Euclidean spanners can be viewed as…

数据结构与算法 · 计算机科学 2022-06-03 Omri Kahalon , Hung Le , Lazar Milenkovic , Shay Solomon

In the context of kernel methods, the similarity between data points is encoded by the kernel function which is often defined thanks to the Euclidean distance, a common example being the squared exponential kernel. Recently, other distances…

机器学习 · 计算机科学 2020-02-06 Henri De Plaen , Michaël Fanuel , Johan A. K. Suykens

Approaches to predicting neuronal spike responses commonly use a Poisson learning objective. This objective quantizes responses into spike counts within a fixed summation interval, typically on the order of 10 to 100 milliseconds in…

神经元与认知 · 定量生物学 2024-07-03 Kevin Doran , Marvin Seifert , Carola A. M. Yovanovich , Tom Baden

When we represent a network of sensors in Euclidean space by a graph, there are two distances between any two nodes that we may consider. One of them is the Euclidean distance. The other is the distance between the two nodes in the graph,…

网络与互联网体系结构 · 计算机科学 2009-06-10 Rodrigo S. C. Leao , Valmir C. Barbosa

We describe a new, computationally simple method for analyzing the dynamics of neuronal spike trains driven by external stimuli. The goal of our method is to test the predictions of simple spike-generating models against extracellularly…

神经元与认知 · 定量生物学 2007-05-23 Daniel S. Reich , Jonathan D. Victor , Bruce W. Knight

Euclidean distance geometry is the study of Euclidean geometry based on the concept of distance. This is useful in several applications where the input data consists of an incomplete set of distances, and the output is a set of points in…

定量方法 · 定量生物学 2012-05-03 Leo Liberti , Carlile Lavor , Nelson Maculan , Antonio Mucherino

Background: Measures of spike train synchrony are widely used in both experimental and computational neuroscience. Time-scale independent and parameter-free measures, such as the ISI-distance, the SPIKE-distance and SPIKE-synchronization,…

数据分析、统计与概率 · 物理学 2017-05-31 Eero Satuvuori , Mario Mulansky , Nebojsa Bozanic , Irene Malvestio , Fleur Zeldenrust , Kerstin Lenk , Thomas Kreuz

Neuroscience has recently made much progress, expanding the complexity of both neural-activity measurements and brain-computational models. However, we lack robust methods for connecting theory and experiment by evaluating our new big…

定量方法 · 定量生物学 2023-07-06 Heiko H. Schütt , Alexander D. Kipnis , Jörn Diedrichsen , Nikolaus Kriegeskorte

Advances in neuroscience have enabled researchers to measure the activities of large numbers of neurons simultaneously in behaving animals. We have access to the fluorescence of each of the neurons which provides a first-order approximation…

神经元与认知 · 定量生物学 2023-07-21 Abhisek Chakraborty

Pattern separation is a computational process by which dissimilar neural patterns are generated from similar input patterns. We present an information-geometric formulation of pattern separation, where a pattern separator is modelled as a…

神经元与认知 · 定量生物学 2024-07-23 Harvey Wang , Selena Singh , Thomas Trappenberg , Abraham Nunes

Spike-based encoders represent information as sequences of spikes or pulses, which are transmitted between neurons. A prevailing consensus suggests that spike-based approaches demonstrate exceptional capabilities in capturing the temporal…

信号处理 · 电气工程与系统科学 2025-06-03 MHD Anas Alsakkal , Runze Wang , Jayawan Wijekoon , Huajin Tang

A wide variety of approaches to estimate the degree of synchrony between two or more spike trains have been proposed. One of the most recent methods is the ISI-distance which extracts information from the interspike intervals (ISIs) by…

生物物理 · 物理学 2012-12-11 Thomas Kreuz , Daniel Chicharro , Martin Greschner , Ralph G Andrzejak

Genomic sequence analysis plays a crucial role in various scientific and medical domains. Traditional machine-learning approaches often struggle to capture the complex relationships and hierarchical structures of sequence data when working…

机器学习 · 计算机科学 2025-10-02 Sarwan Ali , Haris Mansoor , Murray Patterson