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Discovery of microRNAs (miRNAs) relies on predictive models for characteristic features from miRNA precursors (pre-miRNAs). The short length of miRNA genes and the lack of pronounced sequence features complicate this task. To accommodate…

MicroRNAs (miRNAs) are non-coding RNAs with approximately 22 nucleotides (nt) that are derived from precursor molecules. These precursor molecules or pre-miRNAs often fold into stem-loop hairpin structures. However, a large number of…

基因组学 · 定量生物学 2016-10-10 Ling Zhong , Jason T. L. Wang

Since microRNAs (miRNAs) play a crucial role in post-transcriptional gene regulation, miRNA identification is one of the most essential problems in computational biology. miRNAs are usually short in length ranging between 20 and 23 base…

机器学习 · 计算机科学 2016-05-04 Seunghyun Park , Seonwoo Min , Hyunsoo Choi , Sungroh Yoon

MicroRNA (miRNA) are small non-coding RNAs that regulates the gene expression at the post-transcriptional level. Determining whether a sequence segment is miRNA is experimentally challenging. Also, experimental results are sensitive to the…

定量方法 · 定量生物学 2017-04-13 Jaya Thomas , Lee Sael

MicroRNAs (miRNAs) are endogenous small non-coding RNAs that play an important role in post-transcriptional gene regulation. However, the experimental determination of miRNA sequence and structure is both expensive and time-consuming.…

基因组学 · 定量生物学 2021-06-30 Shyaman Jayasundara , Sandali Lokuge , Puwasuru Ihalagedara , Damayanthi Herath

Feature selection (FS) is assumed to improve predictive performance and identify meaningful features in high-dimensional datasets. Surprisingly, small random subsets of features (0.02-1%) match or outperform the predictive performance of…

机器学习 · 计算机科学 2025-09-22 Bhavesh Neekhra , Debayan Gupta , Partha Pratim Chakrabarti

Should we input known genome sequence features or input sequence itself in deep learning framework? As deep learning more popular in various applications, researchers often come to question whether to generate features or use raw sequences…

机器学习 · 计算机科学 2017-10-19 Jaya Thomas , Sonia Thomas , Lee Sael

Feature selection is frequently used as a pre-processing step to machine learning. It is a process of choosing a subset of original features so that the feature space is optimally reduced according to a certain evaluation criterion. The…

计算机视觉与模式识别 · 计算机科学 2014-01-07 Vijendra Singh , Shivani Pathak

Feature selection, as a data preprocessing strategy, has been proven to be effective and efficient in preparing data (especially high-dimensional data) for various data mining and machine learning problems. The objectives of feature…

机器学习 · 计算机科学 2018-08-28 Jundong Li , Kewei Cheng , Suhang Wang , Fred Morstatter , Robert P. Trevino , Jiliang Tang , Huan Liu

The application of machine learning to image and video data often yields a high dimensional feature space. Effective feature selection techniques identify a discriminant feature subspace that lowers computational and modeling costs with…

机器学习 · 计算机科学 2022-06-22 Yijing Yang , Wei Wang , Hongyu Fu , C. -C. Jay Kuo

High-dimensional datasets depict a challenge for learning tasks in data mining and machine learning. Feature selection is an effective technique in dealing with dimensionality reduction. It is often an essential data processing step prior…

In recent years, we have witnessed a considerable increase in performance in image classification tasks. This performance improvement is mainly due to the adoption of deep learning techniques. Generally, deep learning techniques demand a…

计算机视觉与模式识别 · 计算机科学 2023-10-04 Erick da Silva Puls , Matheus V. Todescato , Joel L. Carbonera

Computational analysis methods including machine learning have a significant impact in the fields of genomics and medicine. High-throughput gene expression analysis methods such as microarray technology and RNA sequencing produce enormous…

基因组学 · 定量生物学 2022-09-28 Nikita Bhandari , Rahee Walambe , Ketan Kotecha , Satyajeet Khare

MicroRNAs (miRNAs) are small non-coding RNAs that control gene expression at the post-transcriptional level through complementary base pairing with the target mRNA, leading to mRNA degradation and blocking translation process. Any…

基因组学 · 定量生物学 2020-05-01 Muniba Faiza , Khushnuma Tanveer , Saman Fatihi , Yonghua Wang , Khalid Raza

Discovery of diagnostic and prognostic molecular markers is important and actively pursued the research field in cancer research. For complex diseases, this process is often performed using Machine Learning. The current study compares two…

基因组学 · 定量生物学 2020-04-30 Aneta Polewko-Klim , Witold R. Rudnicki

Nowadays, feature selection is frequently used in machine learning when there is a risk of performance degradation due to overfitting or when computational resources are limited. During the feature selection process, the subset of features…

机器学习 · 计算机科学 2023-01-02 Sergey A. Saltykov

The explosion of data in recent years has generated an increasing need for new analysis techniques in order to extract knowledge from massive datasets. Machine learning has proved particularly useful to perform this task. Fully automatized…

天体物理仪器与方法 · 物理学 2018-08-29 Antonio D'Isanto , Stefano Cavuoti , Fabian Gieseke , Kai Lars Polsterer

Artificial intelligence is nowadays used for cell detection and classification in optical microscopy, during post-acquisition analysis. The microscopes are now fully automated and next expected to be smart, to make acquisition decisions…

Functional or non-coding RNAs are attracting more attention as they are now potentially considered valuable resources in the development of new drugs intended to cure several human diseases. The identification of drugs targeting the…

基因组学 · 定量生物学 2019-12-25 Muhammad Nabeel Asima , Muhammad Imran Malik , Andreas Dengela , Sheraz Ahmed

This paper present a strong data mining method based on rough set, which can realize feature selection, classification and knowledge representation at the same time. Rough set has good interpretability, and is a popular method for feature…

机器学习 · 计算机科学 2022-01-13 Shuyin Xia , Xinyu Bai , Guoyin Wang , Deyu Meng , Xinbo Gao , Zizhong Chen , Elisabeth Giem
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