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Bayesian Markov chain Monte Carlo explores tree space slowly, in part because it frequently returns to the same tree topology. An alternative strategy would be to explore tree space systematically, and never return to the same topology. In…

种群与进化 · 定量生物学 2018-11-28 Chris Whidden , Brian C. Claywell , Thayer Fisher , Andrew F. Magee , Mathieu Fourment , Frederick A. Matsen

We develop the theory and practice of an approach to modelling and probabilistic inference in causal networks that is suitable when application-specific or analysis-specific constraints should inform such inference or when little or no data…

人工智能 · 计算机科学 2017-05-16 Paul Beaumont , Michael Huth

The combination of Monte Carlo tree search and neural networks has revolutionized online planning. As neural network approximations are often imperfect, we ask whether uncertainty estimates about the network outputs could be used to improve…

人工智能 · 计算机科学 2024-06-05 Nir Greshler , David Ben Eli , Carmel Rabinovitz , Gabi Guetta , Liran Gispan , Guy Zohar , Aviv Tamar

We introduce a framework for proving lower bounds on computational problems over distributions against algorithms that can be implemented using access to a statistical query oracle. For such algorithms, access to the input distribution is…

计算复杂性 · 计算机科学 2016-08-16 Vitaly Feldman , Elena Grigorescu , Lev Reyzin , Santosh Vempala , Ying Xiao

The likelihood-free sequential Approximate Bayesian Computation (ABC) algorithms, are increasingly popular inference tools for complex biological models. Such algorithms proceed by constructing a succession of probability distributions over…

统计计算 · 统计学 2012-10-12 Daniel Silk , Saran Filippi , Michael P. H. Stumpf

We consider a variant of the clustering problem for a complete weighted graph. The aim is to partition the nodes into clusters maximizing the sum of the edge weights within the clusters. This problem is known as the clique partitioning…

社会与信息网络 · 计算机科学 2023-09-15 Alexander Belyi , Stanislav Sobolevsky , Alexander Kurbatski , Carlo Ratti

Learning Bayesian networks is often cast as an optimization problem, where the computational task is to find a structure that maximizes a statistically motivated score. By and large, existing learning tools address this optimization problem…

机器学习 · 计算机科学 2013-01-30 Nir Friedman , Iftach Nachman , Dana Pe'er

Bayesian inference typically relies on specifying a parametric model that approximates the data-generating process. However, misspecified models can yield poor convergence rates and unreliable posterior calibration. Bayesian empirical…

统计方法学 · 统计学 2025-10-27 Kenyon Ng , Weichang Yu , Howard D. Bondell

A Bayesian network is a widely used probabilistic graphical model with applications in knowledge discovery and prediction. Learning a Bayesian network (BN) from data can be cast as an optimization problem using the well-known…

人工智能 · 计算机科学 2018-11-14 Zhenyu A. Liao , Charupriya Sharma , James Cussens , Peter van Beek

Structure learning of Bayesian networks is an important problem that arises in numerous machine learning applications. In this work, we present a novel approach for learning the structure of Bayesian networks using the solution of an…

机器学习 · 计算机科学 2012-11-22 Tuhin Sahai , Stefan Klus , Michael Dellnitz

The Bayesian approach has proved to be a coherent approach to handle ill posed Inverse problems. However, the Bayesian calculations need either an optimization or an integral calculation. The maximum a posteriori (MAP) estimation requires…

数据分析、统计与概率 · 物理学 2007-05-23 A. Mohammad-Djafari

Bayesian network structure learning algorithms with limited data are being used in domains such as systems biology and neuroscience to gain insight into the underlying processes that produce observed data. Learning reliable networks from…

机器学习 · 统计学 2013-07-10 Diane Oyen , Terran Lane

With the advent of structured data in the form of social networks, genetic circuits and protein interaction networks, statistical analysis of networks has gained popularity over recent years. Stochastic block model constitutes a classical…

统计理论 · 数学 2015-05-27 Debdeep Pati , Anirban Bhattacharya

An efficient method for finding a better maximizer of computationally extensive probability distributions is proposed on the basis of a Bayesian optimization technique. A key idea of the proposed method is to use extreme values of…

数据分析、统计与概率 · 物理学 2018-03-14 Ryo Tamura , Koji Hukushima

Probability estimation of tree topologies is one of the fundamental tasks in phylogenetic inference. The recently proposed subsplit Bayesian networks (SBNs) provide a powerful probabilistic graphical model for tree topology probability…

种群与进化 · 定量生物学 2024-09-10 Tianyu Xie , Musu Yuan , Minghua Deng , Cheng Zhang

We propose a method for optimal Bayesian filtering with deterministic particles. In order to avoid particle degeneration, the filter step is not performed at once. Instead, the particles progressively flow from prior to posterior. This is…

机器学习 · 统计学 2023-03-07 Uwe D. Hanebeck

In generative models with obscured likelihood, Approximate Bayesian Computation (ABC) is often the tool of last resort for inference. However, ABC demands many prior parameter trials to keep only a small fraction that passes an acceptance…

机器学习 · 计算机科学 2024-04-17 Sean O'Hagan , Jungeum Kim , Veronika Rockova

Current Bayesian net representations do not consider structure in the domain and include all variables in a homogeneous network. At any time, a human reasoner in a large domain may direct his attention to only one of a number of natural…

人工智能 · 计算机科学 2013-03-25 Yang Xiang , David L. Poole , Michael P. Beddoes

Computing and storing probabilities is a hard problem as soon as one has to deal with complex distributions over multiple random variables. The problem of efficient representation of probability distributions is central in term of…

人工智能 · 计算机科学 2016-08-16 David Bellot , Pierre Bessiere

In real-world Bayesian inference applications, prior assumptions regarding the parameters of interest may be unrepresentative of their actual values for a given dataset. In particular, if the likelihood is concentrated far out in the wings…

统计计算 · 统计学 2018-11-01 Xi Chen , Mike Hobson , Saptarshi Das , Paul Gelderblom