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In this paper, we propose a depth-first search (DFS) algorithm for searching maximum matchings in general graphs. Unlike blossom shrinking algorithms, which store all possible alternative alternating paths in the super-vertices shrunk from…

数据结构与算法 · 计算机科学 2022-04-20 Tony T. Lee , Bojun Lu , Hanli Chu

We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…

数据结构与算法 · 计算机科学 2013-08-02 Taku Onodera , Kunihiko Sadakane , Tetsuo Shibuya

We present a new algorithm for exactly solving decision making problems represented as influence diagrams. We do not require the usual assumptions of no forgetting and regularity; this allows us to solve problems with simultaneous decisions…

人工智能 · 计算机科学 2015-03-19 Denis Deratani Mauá , Cassio Polpo de Campos , Marco Zaffalon

This article investigates how graph matching can be applied to process plant design data in order to support the reuse of previous designs. A literature review of existing graph matching algorithms is performed, and a group of algorithms is…

机器学习 · 计算机科学 2021-03-24 Miia Rantala , Hannu Niemistö , Tommi Karhela , Seppo Sierla , Valeriy Vyatkin

Graph neural networks (GNNs) have extended the success of deep neural networks (DNNs) to non-Euclidean graph data, achieving ground-breaking performance on various tasks such as node classification and graph property prediction.…

机器学习 · 计算机科学 2021-12-17 Tianfeng Liu , Yangrui Chen , Dan Li , Chuan Wu , Yibo Zhu , Jun He , Yanghua Peng , Hongzheng Chen , Hongzhi Chen , Chuanxiong Guo

The graph structure is a commonly used data storage mode, and it turns out that the low-dimensional embedded representation of nodes in the graph is extremely useful in various typical tasks, such as node classification, link prediction ,…

社会与信息网络 · 计算机科学 2020-08-03 Xing Li , Wei Wei , Xiangnan Feng , Xue Liu , Zhiming Zheng

Electronic data is growing at increasing rates, in both size and connectivity: the increasing presence of, and interest in, relationships between data. An example is the Twitter social network graph. Due to this growth demand is increasing…

数据库 · 计算机科学 2013-01-23 Alex Averbuch , Martin Neumann

Spiking Neural Networks (SNNs) are widely deployed to solve complex pattern recognition, function approximation and image classification tasks. With the growing size and complexity of these networks, hardware implementation becomes…

神经元与认知 · 定量生物学 2019-08-22 Anup Das , Yuefeng Wu , Khanh Huynh , Francesco Dell'Anna , Francky Catthoor , Siebren Schaafsma

This paper presents new parallel algorithms for generating Euclidean minimum spanning trees and spatial clustering hierarchies (known as HDBSCAN$^*$). Our approach is based on generating a well-separated pair decomposition followed by using…

数据结构与算法 · 计算机科学 2021-04-05 Yiqiu Wang , Shangdi Yu , Yan Gu , Julian Shun

With the aim of obtaining time/space improvements in classic Data Structures, an emerging trend is to combine Machine Learning techniques with the ones proper of Data Structures. This new area goes under the name of Learned Data Structures.…

数据库 · 计算机科学 2022-03-29 Domenico Amato , Giosue' Lo Bosco , Raffaele Giancarlo

In recent years graph neural network (GNN)-based approaches have become a popular strategy for processing point cloud data, regularly achieving state-of-the-art performance on a variety of tasks. To date, the research community has…

计算机视觉与模式识别 · 计算机科学 2021-08-19 Shyam A. Tailor , René de Jong , Tiago Azevedo , Matthew Mattina , Partha Maji

Bloom filter (BF) has been widely used to support membership query, i.e., to judge whether a given element x is a member of a given set S or not. Recent years have seen a flourish design explosion of BF due to its characteristic of…

数据结构与算法 · 计算机科学 2019-01-08 Lailong Luo , Deke Guo , Richard T. B. Ma , Ori Rottenstreich , Xueshan Luo

Data compression plays an important role to deal with high volumes of DNA sequences in the field of Bioinformatics. Again data compression techniques directly affect the alignment of DNA sequences. So the time needed to decompress a…

计算工程、金融与科学 · 计算机科学 2012-11-13 Subhankar Roy , Sunirmal Khatua , Sudipta Roy , Samir K. Bandyopadhyay

Graph Transformers (GTs) with powerful representation learning ability make a huge success in wide range of graph tasks. However, the costs behind outstanding performances of GTs are higher energy consumption and computational overhead. The…

神经与进化计算 · 计算机科学 2024-03-27 Huizhe Zhang , Jintang Li , Liang Chen , Zibin Zheng

Searching on bipartite graphs is basal and versatile to many real-world Web applications, e.g., online recommendation, database retrieval, and query-document searching. Given a query node, the conventional approaches rely on the similarity…

信息检索 · 计算机科学 2023-04-04 Yankai Chen , Yixiang Fang , Yifei Zhang , Irwin King

Bayesian networks in their Factor Graph Reduced Normal Form (FGrn) are a powerful paradigm for implementing inference graphs. Unfortunately, the computational and memory costs of these networks may be considerable, even for relatively small…

机器学习 · 统计学 2021-06-22 Giovanni Di Gennaro , Amedeo Buonanno , Francesco A. N. Palmieri

We present a work-efficient parallel level-synchronous Breadth First Search (BFS) algorithm for shared-memory architectures which achieves the theoretical lower bound on parallel running time. The optimality holds regardless of the shape of…

分布式、并行与集群计算 · 计算机科学 2022-09-20 Jesmin Jahan Tithi , Yonatan Fogel , Rezaul Chowdhury

Continuing the recent trend, in this article we design several space-efficient algorithms for two well-known graph search methods. Both these search methods share the same name {\it breadth-depth search} (henceforth {\sf BDS}), although…

数据结构与算法 · 计算机科学 2019-06-20 Sankardeep Chakraborty , Anish Mukherjee , Srinivasa Rao Satti

Graph processing on GPUs is gaining momentum due to the high throughputs observed compared to traditional CPUs, attributed to the vast number of processing cores on GPUs that can exploit parallelism in graph analytics. This paper discusses…

数据结构与算法 · 计算机科学 2023-07-27 Rohith Krishnan S , Venkata Kalyan Tavva , Rupesh Nasre

Bytewise approximate matching algorithms have in recent years shown significant promise in de- tecting files that are similar at the byte level. This is very useful for digital forensic investigators, who are regularly faced with the…

密码学与安全 · 计算机科学 2022-11-15 David Lillis , Frank Breitinger , Mark Scanlon