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Sparse Autoencoder (SAE) has emerged as a powerful tool for mechanistic interpretability of large language models. Recent works apply SAE to protein language models (PLMs), aiming to extract and analyze biologically meaningful features from…

定量方法 · 定量生物学 2026-01-21 Xiangyu Liu , Haodi Lei , Yi Liu , Yang Liu , Wei Hu

Sparse Autoencoders (SAEs) have been proposed as an unsupervised approach to learn a decomposition of a model's latent space. This enables useful applications such as steering - influencing the output of a model towards a desired concept -…

机器学习 · 计算机科学 2025-12-23 Dana Arad , Aaron Mueller , Yonatan Belinkov

Leveraging the framework of Optimal Transport, we introduce a new family of generative autoencoders with a learnable prior, called Symmetric Wasserstein Autoencoders (SWAEs). We propose to symmetrically match the joint distributions of the…

机器学习 · 计算机科学 2021-06-25 Sun Sun , Hongyu Guo

A rekindled the interest in auto-encoder algorithms has been spurred by recent work on deep learning. Current efforts have been directed towards effective training of auto-encoder architectures with a large number of coding units. Here, we…

机器学习 · 计算机科学 2014-04-18 Luis G. Sanchez Giraldo , Jose C. Principe

This letter introduces a new denoiser that modifies the structure of denoising autoencoder (DAE), namely noise learning based DAE (nlDAE). The proposed nlDAE learns the noise of the input data. Then, the denoising is performed by…

机器学习 · 计算机科学 2022-01-24 Woong-Hee Lee , Mustafa Ozger , Ursula Challita , Ki Won Sung

Autoencoders are certainly among the most studied and used Deep Learning models: the idea behind them is to train a model in order to reconstruct the same input data. The peculiarity of these models is to compress the information through a…

机器学习 · 计算机科学 2023-09-06 Gabriele Martino , Davide Moroni , Massimo Martinelli

Non-parallel text style transfer has attracted increasing research interests in recent years. Despite successes in transferring the style based on the encoder-decoder framework, current approaches still lack the ability to preserve the…

计算与语言 · 计算机科学 2021-02-02 Yukai Shi , Sen Zhang , Chenxing Zhou , Xiaodan Liang , Xiaojun Yang , Liang Lin

Variational Autoencoders (VAEs) provide a theoretically-backed and popular framework for deep generative models. However, learning a VAE from data poses still unanswered theoretical questions and considerable practical challenges. In this…

机器学习 · 计算机科学 2020-06-01 Partha Ghosh , Mehdi S. M. Sajjadi , Antonio Vergari , Michael Black , Bernhard Schölkopf

Mechanistic interpretability of large language models (LLMs) aims to uncover the internal processes of information propagation and reasoning. Sparse autoencoders (SAEs) have demonstrated promise in this domain by extracting interpretable…

机器学习 · 计算机科学 2025-05-26 Wei Shi , Sihang Li , Tao Liang , Mingyang Wan , Guojun Ma , Xiang Wang , Xiangnan He

Variational autoencoders learn unsupervised data representations, but these models frequently converge to minima that fail to preserve meaningful semantic information. For example, variational autoencoders with autoregressive decoders often…

机器学习 · 计算机科学 2019-05-21 Bryan Seybold , Emily Fertig , Alex Alemi , Ian Fischer

Masked graph autoencoder (MGAE) has emerged as a promising self-supervised graph pre-training (SGP) paradigm due to its simplicity and effectiveness. However, existing efforts perform the mask-then-reconstruct operation in the raw data…

机器学习 · 计算机科学 2023-04-07 Wenxuan Tu , Qing Liao , Sihang Zhou , Xin Peng , Chuan Ma , Zhe Liu , Xinwang Liu , Zhiping Cai

Recent state-of-the-art autoencoder based generative models have an encoder-decoder structure and learn a latent representation with a pre-defined distribution that can be sampled from. Implementing the encoder networks of these models in a…

机器学习 · 计算机科学 2020-05-11 D. T. Braithwaite , M. O'Connor , W. B. Kleijn

A popular new method in mechanistic interpretability is to train high-dimensional sparse autoencoders (SAEs) on neuron activations and use SAE features as the atomic units of analysis. However, the body of evidence on whether SAE feature…

机器学习 · 计算机科学 2024-09-10 Maheep Chaudhary , Atticus Geiger

Stacked Auto-Encoder (SAE) is a kind of deep learning algorithm for unsupervised learning. Which has multi layers that project the vector representation of input data into a lower vector space. These projection vectors are dense…

计算机视觉与模式识别 · 计算机科学 2016-10-11 Fei Hu , Changjiu Pu , Haowei Gao , Mengzi Tang , Li Li

This paper investigates a novel algorithmic approach to data representation based on kernel methods. Assuming that the observations lie in a Hilbert space X, the introduced Kernel Autoencoder (KAE) is the composition of mappings from…

机器学习 · 统计学 2020-12-03 Pierre Laforgue , Stephan Clémençon , Florence d'Alché-Buc

Sparse autoencoders (SAEs) decompose neural activations into interpretable features. A widely adopted variant, the TopK SAE, reconstructs each token from its K most active latents. However, this approach is inefficient, as some tokens carry…

机器学习 · 计算机科学 2025-09-01 Narmeen Oozeer , Nirmalendu Prakash , Michael Lan , Alice Rigg , Amirali Abdullah

We present SAE-BrainMap, a novel framework that directly aligns deep learning visual model representations with voxel-level fMRI responses using sparse autoencoders (SAEs). First, we train layer-wise SAEs on model activations and compute…

神经元与认知 · 定量生物学 2025-06-16 Ziming Mao , Jia Xu , Zeqi Zheng , Haofang Zheng , Dabing Sheng , Yaochu Jin , Guoyuan Yang

Understanding the internal machinations of deep Transformer-based NLP models is more crucial than ever as these models see widespread use in various domains that affect the public at large, such as industry, academia, finance, health. While…

计算与语言 · 计算机科学 2026-05-13 Dan Pluth , Zachary Nicholas Houghton , Yu Zhou , Vijay K. Gurbani

Text-to-image diffusion models generate images through an iterative denoising process, so internal neural layers produce trajectories of activations rather than single static representations. Sparse autoencoders (SAEs) have recently been…

计算机视觉与模式识别 · 计算机科学 2026-05-28 Calvin Yeung , Prathyush Poduval , Ali Zakeri , Zhuowen Zou , Mohsen Imani

Sparse autoencoders (SAEs) have been successfully used to discover sparse and human-interpretable representations of the latent activations of LLMs. However, we would ultimately like to understand the computations performed by LLMs and not…

机器学习 · 计算机科学 2025-06-09 Lucy Farnik , Tim Lawson , Conor Houghton , Laurence Aitchison