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Graphs are versatile tools for representing structured data. As a result, a variety of machine learning methods have been studied for graph data analysis. Although many such learning methods depend on the measurement of differences between…

机器学习 · 统计学 2021-06-18 Tomoki Yoshida , Ichiro Takeuchi , Masayuki Karasuyama

Analogous to biological sequence comparison, comparing cellular networks is an important problem that could provide insight into biological understanding and therapeutics. For technical reasons, comparing large networks is computationally…

分子网络 · 定量生物学 2009-01-30 Natasa Przulj

The Weisfeiler-Lehman graph kernels are among the most prevalent graph kernels due to their remarkable time complexity and predictive performance. Their key concept is based on an implicit comparison of neighborhood representing trees with…

机器学习 · 计算机科学 2021-01-21 Till Hendrik Schulz , Tamás Horváth , Pascal Welke , Stefan Wrobel

Identifying networks with similar characteristics in a given ensemble, or detecting pattern discontinuities in a temporal sequence of networks, are two examples of tasks that require an effective metric capable of quantifying network…

社会与信息网络 · 计算机科学 2023-09-07 Carlo Piccardi

Metric learning for classification has been intensively studied over the last decade. The idea is to learn a metric space induced from a normed vector space on which data from different classes are well separated. Different measures of the…

机器学习 · 计算机科学 2019-10-22 Yinan Yu , Tomas McKelvey

Distances between probability distributions are a key component of many statistical machine learning tasks, from two-sample testing to generative modeling, among others. We introduce a novel distance between measures that compares them…

机器学习 · 统计学 2025-07-09 Arturo Castellanos , Anna Korba , Pavlo Mozharovskyi , Hicham Janati

Graph kernel is a powerful tool measuring the similarity between graphs. Most of the existing graph kernels focused on node labels or attributes and ignored graph hierarchical structure information. In order to effectively utilize graph…

机器学习 · 计算机科学 2020-11-03 Kai Ma , Peng Wan , Daoqiang Zhang

As network research becomes more sophisticated, it is more common than ever for researchers to find themselves not studying a single network but needing to analyze sets of networks. An important task when working with sets of networks is…

社会与信息网络 · 计算机科学 2019-07-26 James P. Bagrow , Erik M. Bollt

Heterogeneous graphs, which contain nodes and edges of multiple types, are prevalent in various domains, including bibliographic networks, social media, and knowledge graphs. As a fundamental task in analyzing heterogeneous graphs,…

信息检索 · 计算机科学 2023-05-02 Linhao Luo , Yixiang Fang , Moli Lu , Xin Cao , Xiaofeng Zhang , Wenjie Zhang

Biological and cellular systems are often modeled as graphs in which vertices represent objects of interest (genes, proteins, drugs) and edges represent relational ties among these objects (binds-to, interacts-with, regulates). This…

机器学习 · 统计学 2017-03-16 Jose Lugo-Martinez , Predrag Radivojac

A novel kernel-based support vector machine (SVM) for graph classification is proposed. The SVM feature space mapping consists of a sequence of graph convolutional layers, which generates a vector space representation for each vertex,…

机器学习 · 计算机科学 2020-08-05 Padraig Corcoran

Most metric learning algorithms, as well as Fisher's Discriminant Analysis (FDA), optimize some cost function of different measures of within-and between-class distances. On the other hand, Support Vector Machines(SVMs) and several Multiple…

机器学习 · 计算机科学 2013-09-17 Huyen Do , Alexandros Kalousis

Sequence classification has numerous applications in various fields. Despite extensive studies in the last decades, many challenges still exist, particularly in pattern-based methods. Existing pattern-based methods measure the…

机器学习 · 计算机科学 2023-10-23 Junjie Dong , Mudi Jiang , Lianyu Hu , Zengyou He

Even though machine learning algorithms already play a significant role in data science, many current methods pose unrealistic assumptions on input data. The application of such methods is difficult due to incompatible data formats, or…

机器学习 · 计算机科学 2022-06-09 Simon Mandlik , Tomas Pevny

Identifying and quantifying structural dissimilarities between complex networks is a fundamental and challenging problem in network science. Previous network comparison methods are based on the structural features, such as the length of…

社会与信息网络 · 计算机科学 2021-11-29 Zhipeng Wang , Xiu-Xiu Zhan , Chuang Liu , Zi-Ke Zhang

Network theory provides a principled abstraction of the human brain: reducing a complex system into a simpler representation from which to investigate brain organisation. Recent advancement in the neuroimaging field are towards representing…

神经元与认知 · 定量生物学 2016-05-02 Ai Wern Chung , Emanuele Pesce , Ricardo Pio Monti , Giovanni Montana

Most state-of-the-art graph kernels only take local graph properties into account, i.e., the kernel is computed with regard to properties of the neighborhood of vertices or other small substructures. On the other hand, kernels that do take…

机器学习 · 计算机科学 2017-09-25 Christopher Morris , Kristian Kersting , Petra Mutzel

In recent years, networks with higher-order interactions have emerged as a powerful tool to model complex systems. Comparing these higher-order systems remains however a challenge. Traditional similarity measures designed for pairwise…

物理与社会 · 物理学 2026-02-24 Cosimo Agostinelli , Marco Mancastroppa , Alain Barrat

This document reviews the definition of the kernel distance, providing a gentle introduction tailored to a reader with background in theoretical computer science, but limited exposure to technology more common to machine learning,…

计算几何 · 计算机科学 2011-03-11 Jeff M. Phillips , Suresh Venkatasubramanian

This article investigates the probabilistic relationship between quantum classification of Boolean functions and their Hamming distance. By integrating concepts from quantum computing, information theory, and combinatorics, we explore how…