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Depletion forces play a role in the compaction and de-compation of chromosomal material in simple cells but it remains debatable whether they are sufficient to account for chromosomal collapse. We present coarse-grained molecular dynamics…

软凝聚态物质 · 物理学 2015-06-22 Tyler N. Shendruk , Martin Bertrand , Hendrick W. de Haan , James L. Harden , Gary W. Slater

We discuss the reliability of integral-equation methods based on several commonly used closure relations in determining the phase diagram of coarse-grained models of soft-matter systems characterized by mutually interacting soft and…

软凝聚态物质 · 物理学 2015-10-28 Roberto Menichetti , Andrea Pelissetto , Giuseppe D'Adamo , Carlo Pierleoni

Colloidal gels, like many other soft and disordered solids derive their mechanical properties not only from the strength of interparticle attraction, but also from the symmetry of the forces that constrain particle motion. While non-central…

软凝聚态物质 · 物理学 2026-03-17 Ziye Zhuang , Robert A. Campbell , Paniz Haghighi , Safa Jamali , Ali Mohraz

We develop a strong stretching approximation for a polymer brush made of self-avoiding polymer chains. The density profile of the brush and the distribution of the end monomer positions in stretching direction are computed and compared with…

软凝聚态物质 · 物理学 2021-05-26 Dirk Romeis , Michael Lang

The transport of solvent molecules through soft, swollen networks is critical in both natural and engineered systems. While this poroelastic flow has traditionally been explored in networks where the mesh size is comparable to the solvent…

软凝聚态物质 · 物理学 2025-09-03 Nolan A. Miller , Alfred J. Crosby

We use molecular simulations to study jamming of a crumpled bead-spring model polymer in a finite container and compare to jamming of repulsive spheres. After proper constraint counting, the onset of rigidity is seen to occur isostatically…

软凝聚态物质 · 物理学 2019-06-05 Samuel M. Soik , Tristan A. Sharp

We briefly review recent advances in the hydrodynamic modeling of the dynamics of droplets on adaptive substrates, in particular, solids that are covered by polymer brushes. Thereby, the focus are long-wave and full-curvature variants of…

流体动力学 · 物理学 2024-08-05 Simon Hartmann , Jan Diekmann , Daniel Greve , Uwe Thiele

Soft particles display highly versatile properties with respect to hard colloids, even more so at fluid-fluid interfaces. In particular, microgels, consisting of a cross-linked polymer network, are able to deform and flatten upon adsorption…

A comparative dynamic Monte Carlo simulation study of polydisperse living polymer brushes, created by surface initiated living polymerization, and conventional polymer monodisperse brush, comprising linear polymer chains, grafted to a…

软凝聚态物质 · 物理学 2012-12-04 K. Jalili , F. Abbasi , A. Milchev

We analyze the structural behavior of a single polymer chain grafted to an attractive, flexible surface. Our model is composed of a coarse-grained bead-and-spring polymer and a tethered membrane. By means of extensive parallel tempering…

软凝聚态物质 · 物理学 2011-09-26 Steffen Karalus , Wolfhard Janke , Michael Bachmann

A large body of experimental work on the microstructure and dynamics of simplifiedindustrial nanocomposites made of disordered silica filler in a styrene-butadiene matrixby solid-phase mixing is regrouped and critically discussed in this…

软凝聚态物质 · 物理学 2018-11-21 Anne-Caroline Genix , Guilhem P. Baeza , Julian Oberdisse

The rapid collapse of a polymer, due to external forces or changes in solvent, yields a long-lived `crumpled globule.' The conjectured fractal structure shaped by hierarchical collapse dynamics has proved difficult to establish, even with…

软凝聚态物质 · 物理学 2015-10-07 Guy Bunin , Mehran Kardar

Oriented block copolymers exhibit a buckling instability when submitted to a tensile test perpendicular to the lamellae direction. In this paper we study this behavior using a coarse grained molecular dynamics simulation approach. Coarse…

材料科学 · 物理学 2014-03-05 Ali Makke , Olivier Lame , Michel Perez , Jean-Louis Barrat

From understanding the sand on the beach to the foam on your beer, soft sphere simulations have been crucial to the study of the amorphous world around us. However, many of the materials we interact with on a daily basis aren't comprised of…

软凝聚态物质 · 物理学 2024-03-18 R. C. Dennis

From glycosylated cell surfaces to sterically stabilized liposomes, polymers attached to membranes attract biological and therapeutic interest. Can the scaling laws of polymer "brushes" describe the physical properties of these coats? We…

软凝聚态物质 · 物理学 2007-05-23 Per Lyngs Hansen , Joel A. Cohen , Rudi Podgornik , V. Adrian Parsegian

Fundamental understanding of the effect of microscopic parameters on the dynamics of probe particles in different complex environments has wide implications. Examples include diffusion of proteins in the biological hydrogels, porous media,…

软凝聚态物质 · 物理学 2019-09-11 Praveen Kumar , Ligesh Theeyancheri , Subhasish Chaki , Rajarshi Chakrabarti

Theories of strongly stretched polymer brushes, particularly the parabolic brush theory, are valuable for providing analytically tractable predictions for the thermodynamic behavior of surface-grafted polymers in a wide range of settings.…

软凝聚态物质 · 物理学 2022-01-05 Michael S. Dimitriyev , Gregory M. Grason

Inwardly curved polymer brushes are present in cylindrical and spherical micelles or in membranes tubes and vesicles decorated with anchored polymers, and influence their stability. We consider such polymer brushes in good solvent and show…

软凝聚态物质 · 物理学 2010-06-22 Manoel Manghi , Miguel Aubouy , Cyprien Gay , Christian Ligoure

Particle simulations confined by sharp walls usually develop an oscillatory density profile. For some applications, most notably soft matter liquids, this behavior is often unrealistic and one expects a monotonic density climb instead. To…

计算物理 · 物理学 2016-11-02 Airidas Korolkovas

Inspired by recent experiments on the spatial organization of bacterial chromosomes, we consider a type of "bottle brush" polymer consisting of a flexible backbone chain, to which flexible side loops are connected. We show that such a model…

生物物理 · 物理学 2012-07-10 Debasish Chaudhuri , Bela M. Mulder