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Spiking Neural Networks have earned increased recognition in recent years owing to their biological plausibility and event-driven computation. Spiking neurons are the fundamental building components of Spiking Neural Networks. Those neurons…

神经与进化计算 · 计算机科学 2025-06-04 Amr Nabil , T. Nandha Kumar , Haider Abbas F. Almurib

Classical models for predicting current flow in excitable cells such as axons, originally proposed by Hodgkin and Huxley, rely on empirical voltage-gating parameters that quantify ion transport across sodium and potassium ion channels. We…

Motile cilia are slender, hair-like cellular appendages that spontaneously oscillate under the action of internal molecular motors and are typically found in dense arrays. These active filaments coordinate their beating to generate…

软凝聚态物质 · 物理学 2022-01-28 Brato Chakrabarti , Sebastian Fürthauer , Michael J. Shelley

A simple model of the driven motion of interacting particles in a two dimensional random medium is analyzed, focusing on the critical behavior near to the threshold that separates a static phase from a flowing phase with a steady-state…

统计力学 · 物理学 2008-02-03 Joe Watson , Daniel S. Fisher

Contact inhibition plays a crucial role in the motility of cells, the process of wound healing, and the formation of tumors. By mimicking the mechanical motion of calls crawling on a substrate using a pseudopod, we constructed a minimal…

软凝聚态物质 · 物理学 2016-11-28 Simon Kaspar Schnyder , Yuki Tanaka , John Jairo Molina , Ryoichi Yamamoto

It has recently been observed that the occurrence of sudden cardiac death has a close statistical relationship with the time of day, viz., ventricular fibrillation is most likely to occur between 12 am-6 am, with 6 pm-12 am being the next…

组织与器官 · 定量生物学 2016-09-30 Pavithraa Seenivasan , Shakti N. Menon , S. Sridhar , Sitabhra Sinha

Neural systems can be modeled as networks of functionally connected neural elements. The resulting network can be analyzed using mathematical tools from network science and graph theory to quantify the system's topological organization and…

神经元与认知 · 定量生物学 2020-07-01 Richard F. Betzel , Katherine C. Wood , Christopher Angeloni , Maria Neimark Geffen , Danielle S. Bassett

The thermodynamic potential and thermal dependence of low lying mass spectra of scalars and pseudoscalars are evaluated in a generalized Nambu -- Jona-Lasinio model, which incorporates eight-quark interactions. These are necessary to…

高能物理 - 唯象学 · 物理学 2009-11-13 B. Hiller , A. A. Osipov , J. Moreira , A. H. Blin

We study quantum transport properties of finite periodic quasi-one-dimensional waveguides whose classical dynamics is diffusive. The system we consider is a scattering configuration, composed of a finite periodic chain of $L$ identical…

统计力学 · 物理学 2012-01-18 Jaime Zuñiga Vukusich

Liquid-liquid phase separation has emerged as a fundamental mechanism underlying intracellular organization, with evidence for it being reported in numerous different systems. However, there is a growing concern regarding the lack of…

软凝聚态物质 · 物理学 2022-12-09 Mrityunjay Kothari , Tal Cohen

We present a review on the study of metastable silicon, primarily focusing mainly on the aspects of liquid-liquid transition, critical point and phase behaviour, structural and dynamic properties of liquid phase as well as crystal…

材料科学 · 物理学 2021-09-01 Vishwas V. Vasisht , Srikanth Sastry

To explain the differentiation of stem cells in terms of dynamical systems theory, models of interacting cells with intracellular protein expression dynamics are analyzed and simulated. Simulations were carried out for all possible protein…

细胞行为 · 定量生物学 2015-06-15 Yusuke Goto , Kunihiko Kaneko

The physiology of voltage gated ion channels is complex and insights into their gating mechanism is incomplete. Their function is best represented by Markov models with relatively large number of distinct states that are connected by…

亚细胞过程 · 定量生物学 2013-12-17 Febe Francis , Míriam R. García , Oliver Mason , Richard H. Middleton

Our goal is to model and measure functional and effective (directional) connectivity in multichannel brain physiological signals (e.g., electroencephalograms, local field potentials). The difficulties from analyzing these data mainly come…

应用统计 · 统计学 2017-12-04 Lechuan Hu , Norbert Fortin , Hernando Ombao

Molecular-scale dynamics in sub- to super-critical water is studied with inelastic X-ray scattering and molecular dynamics simulations. The obtained longitudinal current correlation spectra can be decomposed into two main components: a…

软凝聚态物质 · 物理学 2020-12-15 Peihao Sun , J. B. Hastings , Daisuke Ishikawa , Alfred Q. R. Baron , Giulio Monaco

Using a three-dimensional quasiclassical technique we explore molecular double ionization by a linearly polarized, infrared (800~nm) 27~fs laser pulse. For intensities ranging from the tunneling to the over-the-barrier regime, we identify…

原子物理 · 物理学 2011-01-27 A. Emmanouilidou , D. S. Tchitchekova

Recently, it has been suggested that ion channel selectivity filter may exhibit quantum coherence, which may be appropriate to explain ion selection and conduction processes. Potassium channels play a vital role in many physiological…

量子物理 · 物理学 2022-05-31 Mina Seifi , Ali Soltanmanesh , Afshin Shafiee

Similar activity patterns may arise from model neural networks with distinct coupling properties and individual unit dynamics. These similar patterns may, however, respond differently to parameter variations and, specifically, to tuning of…

神经元与认知 · 定量生物学 2023-06-16 Zhuojun Yu , Jonathan E. Rubin , Peter J. Thomas

Due to structural incommensurability, the emergence of a quasicrystal from a crystalline phase represents a challenge to computational physics. Here the nucleation of quasicrystals is investigated by using an efficient computational method…

材料科学 · 物理学 2022-01-05 Jianyuan Yin , Kai Jiang , An-Chang Shi , Pingwen Zhang , Lei Zhang

Neuronal systems maintain stable functions despite large variability in their physiological components. Ion channel expression, in particular, is highly variable in neurons exhibiting similar electrophysiological phenotypes, which poses…

神经元与认知 · 定量生物学 2026-05-13 Arthur Fyon , Alessio Franci , Pierre Sacré , Guillaume Drion
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