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A square lattice is introduced into the Penna model for biological aging in order to study the evolution of diploid sexual populations under certain conditions when one single locus in the individual's genome is considered as identifier of…

种群与进化 · 定量生物学 2009-11-10 A. O. Sousa

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

适应与自组织系统 · 物理学 2012-08-31 Andrzej Pekalski , Marcel Ausloos

The expansion of a population into new habitat is a transient process that leaves its footprints in the genetic composition of the expanding population. How the structure of the environment shapes the population front and the evolutionary…

种群与进化 · 定量生物学 2018-11-26 Daniel A. Beller , Kim M. J. Alards , Francesca Tesser , Ricardo A. Mosna , Federico Toschi , Wolfram Möbius

A microscopic agent dynamical model for diploid age-structured populations is used to study evolution of polymorphism and sympatric speciation. The underlying ecology is represented by a unimodal distribution of resources of some width.…

种群与进化 · 定量生物学 2015-06-26 E. Brigatti , J. S. Sa' Martins , I. Roditi

Environmental changes greatly influence the evolution of populations. Here, we study the dynamics of a population of two strains, one growing slightly faster than the other, competing for resources in a time-varying binary environment…

种群与进化 · 定量生物学 2020-07-28 Ami Taitelbaum , Robert West , Michael Assaf , Mauro Mobilia

Resource are often not uniformly distributed within a population. Spatial variations of concentration of a resource, change the fitness of competing strategies locally. The notion of fitness varying with respect to both genotype and…

种群与进化 · 定量生物学 2022-04-08 Hossein Nemati , Mohammad Reza Ejtehadi , Kamran Kaveh

The role of the selection pressure and mutation amplitude on the behavior of a single-species population evolving on a two-dimensional lattice, in a periodically changing environment, is studied both analytically and numerically. The…

种群与进化 · 定量生物学 2009-11-13 Ioana Bena , Michel Droz , Janusz Szwabinski , Andrzej Pekalski

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

种群与进化 · 定量生物学 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

The spatial scale of population synchrony gives the characteristic distance at which the population fluctuations are correlated. Therefore, it gives also the characteristic size of the regions of simultaneous population depletion, or even…

种群与进化 · 定量生物学 2020-12-22 Miguel Ángel Fernández-Grande , Francisco Javier Cao-Garcia

Environment plays a fundamental role in the competition for resources, and hence in the evolution of populations. Here, we study a well-mixed, finite population consisting of two strains competing for the limited resources provided by an…

种群与进化 · 定量生物学 2017-10-16 Karl Wienand , Erwin Frey , Mauro Mobilia

In contrast to the neutral population cycles of the deterministic mean-field Lotka--Volterra rate equations, including spatial structure and stochastic noise in models for predator-prey interactions yields complex spatio-temporal structures…

种群与进化 · 定量生物学 2013-10-16 Ulrich Dobramysl , Uwe C. Tauber

Using a lattice model based on Monte Carlo simulations, we study the role of the reproduction pattern on the fate of an evolving population. Each individual is under the selection pressure from the environment and random mutations. The…

统计力学 · 物理学 2009-11-10 Mingfeng He , Hongbo Ruan , Changliang Yu , Lei Yao

In this study, we construct an evolutionary model of a population of DNA sequences interacting with the surrounding environment on the topological monoid A* of strings on the alphabet A = { a, c, g, t }. A partial differential equation…

种群与进化 · 定量生物学 2017-06-06 Hitoshi Koyano , Kouji Yano

We study the evolutionary dynamics of a phenotypically structured population in a changing environment , where the environmental conditions vary with a linear trend but in an oscillatory manner. Such phenomena can be described by parabolic…

偏微分方程分析 · 数学 2021-05-04 Susely Figueroa Iglesias , Sepideh Mirrahimi

Community assembly is studied using individual-based multispecies models. The models have stochastic population dynamics with mutation, migration, and extinction of species. Mutants appear as a result of mutation of the resident species,…

种群与进化 · 定量生物学 2010-05-18 Yohsuke Murase , Takashi Shimada , Nobuyasu Ito , Per Arne Rikvold

We present studies for an individual based model of three interacting populations whose individuals are mobile in a 2D-lattice. We focus on the pattern formation in the spatial distributions of the populations. Also relevant is the…

种群与进化 · 定量生物学 2007-12-18 I. C. Charret , M. V. Carneiro

A key question in evolution is how likely a mutant is to take over. This depends on natural selection and on stochastic fluctuations. Population spatial structure can impact mutant fixation probabilities. We introduce a model for structured…

种群与进化 · 定量生物学 2021-11-23 Loïc Marrec , Irene Lamberti , Anne-Florence Bitbol

We present an individual-based model for two interacting populations diffusing on lattices in which a strong natural selection develops spontaneously. The models combine traditional local predator-prey dynamics with random walks.…

种群与进化 · 定量生物学 2007-05-23 Monica F. B. Moreira , Marcio P. Dantas , A. T. Costa

We describe the simulation method of modelling the population evolution using Monte Carlo based on the Penna model. Individuals in the populations are represented by their diploid genomes. Genes expressed after the minimum reproduction age…

基因组学 · 定量生物学 2009-01-13 Agnieszka Laszkiewicz , Przemyslaw Biecek , Katarzyna Bonkowska , Stanislaw Cebrat

We introduce a multi-locus genetically acquired phenotype, submitted to mutations and with selective value, in an age-structured model for biological aging. This phenotype describes a single-trait effect of the environment on an individual,…

统计力学 · 物理学 2009-10-31 J. S. Sa' Martins , S. Moss de Oliveira , G. A. de Medeiros
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