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Intracellular protein patterns regulate many vital cellular functions, such as the processing of spatiotemporal information or the control of shape deformations. To do so, pattern-forming systems can be sensitive to the cell geometry by…

生物物理 · 物理学 2024-05-15 Tom Burkart , Benedikt J. Müller , Erwin Frey

The energy-water demands of metropolitan regions and agricultural ecosystems are ever-increasing. To tackle this challenge efficiently and sustainably, the interdependence of these interconnected resources has to be considered. In this…

最优化与控制 · 数学 2023-08-16 M. Di Martino , P. Linke , E. N. Pistikopoulos

In many networks such as transportation or communication networks, distance is certainly a relevant parameter. In addition, real-world examples suggest that when long-range links are existing, they usually connect to hubs-the well connected…

无序系统与神经网络 · 物理学 2009-11-07 Marc Barthelemy

Modeling and topological analysis of networks in biological and other complex systems, must venture beyond the limited consideration of very few network metrics like degree, betweenness or assortativity. A proper identification of…

定量方法 · 定量生物学 2012-09-25 Soumen Roy

Source-sink systems are metapopulations of habitat patches with different, and possibly temporally varying, habitat qualities, which are commonly used in ecology to study the fate of spatially extended natural populations. We propose new…

概率论 · 数学 2012-10-18 Vincent Bansaye , Amaury Lambert

Geometric constraints impact the formation of a broad range of spatial networks, from amino acid chains folding to proteins structures to rearranging particle aggregates. How the network of interactions dynamically self-organizes in such…

分子网络 · 定量生物学 2016-10-19 Nora Molkenthin , Marc Timme

Power systems are very large and complex, it can be influenced by many unexpected events this makes power system optimization problems difficult to solve, hence methods for solving these problems ought to be an active research topic. This…

神经与进化计算 · 计算机科学 2024-05-03 Soufiane Bouabbadi

We investigate the bulk rheology of dense granular flow down a rough slope, where the density profile has been found to show a plateau except for the boundary layers in simulations [Silbert {\it et al.}, Phys. Rev. E {\bf 64}, 051302…

统计力学 · 物理学 2009-11-10 Namiko Mitarai , Hiizu Nakanishi

We consider the scaling laws, second-order statistics and entropy of the consumed energy of metropolis cities which are hybrid complex systems comprising social networks, engineering systems, agricultural output, economic activity and…

物理与社会 · 物理学 2017-12-18 Syed Amaar Ahmad

Both natural and engineered supply networks exhibit universal structural patterns, such as the formation of loops, yet the principles governing optimal structures remain unclear. These patterns can be interpreted as solutions of…

适应与自组织系统 · 物理学 2026-04-21 Aarathi Parameswaran , Andrea Benigni , Dirk Witthaut , Iva Bačić

Supply chains are fundamental to the economy of the world and many supply chains focus on perishable items, such as food, or even clothing that is subject to a limited shelf life due to fashion and seasonable effects. G-networks have not…

最优化与控制 · 数学 2021-01-20 Yi Wang

The solid-on-solid model provides a commonly used framework for the description of surfaces. In the last years it has been extended in order to investigate the effect of defects in the bulk on the roughness of the surface. The determination…

凝聚态物理 · 物理学 2009-10-28 U. Blasum , W. Hochstättler , C. Moll , H. Rieger

A theory for studying the dynamic scaling properties of branes and relativistic topological defect networks is presented. The theory, based on a relativistic version of the level set method, well-known in other contexts, possesses…

高能物理 - 唯象学 · 物理学 2009-11-07 Mark Hindmarsh

Flux sampling is an analysis that, based on a distribution, picks randomly an efficient number of points from the solution space of a metabolic model. Unlike most constraint-based analyses, flux sampling does not require an objective…

分子网络 · 定量生物学 2026-04-01 Haris Zafeiropoulos , Daniel Rios Garza

We consider a noninteracting disordered system designed to model particle diffusion, relaxation in glasses, and impurity bands of semiconductors. Disorder originates in the random spatial distribution of sites. We find strong numerical…

无序系统与神经网络 · 物理学 2015-03-17 Jacob J. Krich , Alán Aspuru-Guzik

Metabolic scaling is one of the most important patterns in biology. Theory explaining the 3/4-power size-scaling of biological metabolic rate does not predict the non-linear scaling observed for smaller life forms. Here we present a new…

生物物理 · 物理学 2024-03-04 Mark E. Ritchie , Christopher P. Kempes

We investigate the dependence of river network scaling on the relative dominance of slope vs. noise in initial conditions, using an erosion model. Increasing slope causes network patterns to transition from dendritic to parallel and results…

地球物理 · 物理学 2009-09-29 Geoffrey M. Poore , Susan W. Kieffer

We give exact relations which are valid for small-world networks (SWN's) with a general `degree distribution', i.e the distribution of nearest-neighbor connections. For the original SWN model, we illustrate how these exact relations can be…

无序系统与神经网络 · 物理学 2009-11-07 E. Almaas , R. V. Kulkarni , D. Stroud

This article overviews how gradient flows, and discretizations thereof, are useful to design and analyze optimization and sampling algorithms. The interplay between optimization, sampling, and gradient flows is an active research area; our…

统计计算 · 统计学 2023-02-23 N. Garcia Trillos , B. Hosseini , D. Sanz-Alonso

In this paper, we study the maximum entropy sampling problem (MESP) and its variants. MESP seeks to identify a small subset of variables that maximizes the determinant of a covariance submatrix, and is a fundamental model in optimal…

最优化与控制 · 数学 2026-04-14 Lingqing Shen , Fatma Kılınç-Karzan