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{\it E. coli} bacteria swim in straight runs interrupted by sudden reorientation events called tumbles. The resulting random walks give rise to density fluctuations that can be derived analytically in the limit of non interacting particles…

统计力学 · 物理学 2013-09-05 M. Paoluzzi , R. Di Leonardo , L. Angelani

We simulate by lattice Boltzmann the nonequilibrium steady states of run-and-tumble particles (inspired by a minimal model of bacteria), interacting by far-field hydrodynamics, subject to confinement. Under gravity, hydrodynamic…

统计力学 · 物理学 2010-07-01 R. W. Nash , R. Adhikari , J. Tailleur , M. E. Cates

Sedimentation in active fluids has come into focus due to the ubiquity of swimming micro-organisms in natural and artificial environments. Here, we experimentally investigate sedimentation of passive particles in water containing various…

流体动力学 · 物理学 2017-10-12 Jaspreet Singh , Alison E. Patteson , Prashant K. Purohit , Paulo E. Arratia

Run-and-tumble dynamics is a wide-spread mechanism of swimming bacteria. The accumulation of run-and-tumble microswimmers near impermeable surfaces is studied theoretically and numerically in the low-density limit in two and three spatial…

统计力学 · 物理学 2015-03-29 Jens Elgeti , Gerhard Gompper

Run-and-tumble is a basic model of persistent motion and a motility strategy widespread in micro-organisms and individual cells. In many natural settings, movement occurs in the presence of confinement. While accumulation at the surface has…

软凝聚态物质 · 物理学 2024-04-12 T. Pietrangeli , C. Ybert , C. Cottin-Bizonne , F. Detcheverry

The sedimentation process in a suspension of bacteria is the result of the competition between gravity and the intrinsic motion of the microorganisms. We perform simulations of run-and-tumble "squirmers" that move in a fluid medium,…

软凝聚态物质 · 物理学 2021-11-11 Andrea Scagliarini , Ignacio Pagonabarraga

Microorganisms are ubiquitous in nature and technology. They inhabit diverse environments ranging from small river tributaries and lakes to oceans, as well as wastewater treatment plants and food manufacturing. In many of these…

We study a model of self propelled particles exhibiting run and tumble dynamics on lattice. This non-Brownian diffusion is characterised by a random walk with a finite persistence length between changes of direction, and is inspired by the…

统计力学 · 物理学 2015-03-17 A. G. Thompson , J. Tailleur , M. E. Cates , R. A. Blythe

Sedimentation in active fluids has come into focus due to the ubiquity of swimming micro-organisms in natural and industrial processes. Here, we investigate sedimentation dynamics of passive particles in a fluid as a function of bacteria E.…

We consider self-propelled particles undergoing run-and-tumble dynamics (as exhibited by E. coli) in one dimension. Building on previous analyses at drift-diffusion level for the one-particle density, we add both interactions and noise,…

统计力学 · 物理学 2008-08-14 J. Tailleur , M. E. Cates

Self-propelled particles move along circles rather than along a straight line when their driving force does not coincide with their propagation direction. Examples include confined bacteria and spermatozoa, catalytically driven nanorods,…

软凝聚态物质 · 物理学 2008-08-18 Sven van Teeffelen , Hartmut Löwen

Complex or hostile environments can sometimes inhibit the movement capabilities of diffusive particles or active swimmers, who may thus become stuck in fixed positions. This occurs, for example, in the adhesion of bacteria to surfaces at…

统计力学 · 物理学 2024-01-12 Luca Angelani

Active propulsion, as performed by bacteria and Janus particles, in combination with hydrodynamic interaction results in the accumulation of bacteria at a flat wall. However, in microfluidic devices with cylindrical pillars of sufficiently…

生物物理 · 物理学 2024-04-15 Theresa Jakuszeit , Ottavio A. Croze

In our article we present a computational model for the simulation of self-propelled anisotropic bacteria. To this end we use a self-propelled particle model and augment it with a statistical algorithm for the run-and-tumble motion. We…

软凝聚态物质 · 物理学 2020-06-17 Miru Lee , Kai Szuttor , Christian Holm

Numerous natural systems depend on the sedimentation of passive particles in presence of swimming microorganisms. Here, we investigate the dynamics of the sedimentation of spherical colloids at various E. coli concentration within the…

Active particles such as swimming bacteria or self-propelled colloids are known to spontaneously organize into fascinating large-scale dynamic structures. The emergence of these collective states from the motility pattern of the individual…

软凝聚态物质 · 物理学 2019-11-20 Hamid Karan , Gerardo E. Pradillo , Petia M. Vlahovska

Many swimming bacteria naturally inhabit confined environments, yet how confinement influences their swimming behaviors remains unclear. Here, we combine experiments, continuum modeling and particle-based simulations to investigate…

生物物理 · 物理学 2025-10-13 Da Wei , Shiyuan Hu , Tangmiao Tang , Yaochen Yang , Fanlong Meng , Yi Peng

Randomly moving active particles can be herded into directed motion by asymmetric geometric structures. Although such a rectification process has been extensively studied due to its fundamental, biological, and technological relevance, a…

软凝聚态物质 · 物理学 2026-03-31 Satyam Anand , Xiaolei Ma , Shuo Guo , Stefano Martiniani , Xiang Cheng

We numerically study the dynamics of run-and-tumble particles confined in two chambers connected by thin channels. Two dominant dynamical behaviors emerge: (i) an oscillatory pumping state, in which particles periodically fill the two…

软凝聚态物质 · 物理学 2015-11-04 M. Paoluzzi , R. Di Leonardo , L. Angelani

A hallmark of bacteria is their so-called "run-and-tumble" motion, consisting of a sequence of linear directed "runs" and random rotations that constantly alternate due to biochemical feedback. It plays a crucial role in the ability of…

软凝聚态物质 · 物理学 2024-02-21 Gordei Anchutkin , Viktor Holubec , Frank Cichos
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