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Ecosystems, which are intricate amalgams of biological communities and their surrounding environments, continually evolve under the influence of their myriad interactions. The world is currently facing intensifying environmental…

生物物理 · 物理学 2023-11-23 Ikumi Kobayashi

Microorganisms live in environments that inevitably fluctuate between mild and harsh conditions. As harsh conditions may cause extinctions, the rate at which fluctuations occur can shape microbial communities and their diversity, but we…

种群与进化 · 定量生物学 2021-10-14 Shota Shibasaki , Mauro Mobilia , Sara Mitri

Both evolution and ecology have long been concerned with the impact of variable environmental conditions on observed levels of genetic diversity within and between species. We model the evolution of a quantitative trait under selection that…

种群与进化 · 定量生物学 2014-11-17 Hannes Svardal , Claus Rueffler , Joachim Hermisson

Microbial populations generally evolve in volatile environments, under conditions fluctuating between harsh and mild, e.g. as the result of sudden changes in toxin concentration or nutrient abundance. Environmental variability thus shapes…

种群与进化 · 定量生物学 2023-12-07 Matthew Asker , Lluís Hernández-Navarro , Alastair M. Rucklidge , Mauro Mobilia

We describe a simple model of evolution which incorporates the branching and extinction of species lines, and also includes abiotic influences. A first principles approach is taken in which the probability for speciation and extinction are…

adap-org · 物理学 2008-02-03 D. A. Head , G. J. Rodgers

Two species with similar resource requirements respond in a characteristic way to variations in their habitat -- their abundances rise and fall in concert. We use this idea to learn how bacterial populations in the microbiota respond to…

种群与进化 · 定量生物学 2015-10-02 Charles K. Fisher , Thierry Mora , Aleksandra M. Walczak

Highly-diverse ecosystems exhibit a broad distribution of population sizes and species turnover, where species at high and low abundances are exchanged over time. We show that these two features generically emerge in the fluctuating phase…

种群与进化 · 定量生物学 2024-01-09 Thibaut Arnoulx de Pirey , Guy Bunin

Species growing in environments that change in time and space will vary in their abundance across locations, even in the absence of persistent location preferences. Here we quantify this non-equilibrium effect by studying a minimal model of…

种群与进化 · 定量生物学 2026-03-04 James F. D. Henderson , Andreas Tiffeau-Mayer

Many physical and natural systems, including the population of species, evolve in habitats with spatial stochastic variations of the individuals' motility. We study here the effect of those fluctuations on invasion and genetic loss. A…

种群与进化 · 定量生物学 2019-08-08 Youness Azimzade , Mahdi Sasar , Víctor M. Pérez García

Until recently, much of the microbial world was hidden from view. A global research effort has changed this, unveiling and quantifying microbial diversity across enormous range of critically-important contexts, from the human microbiome, to…

种群与进化 · 定量生物学 2017-10-26 Alice Doucet-Beaupré , James P. O'Dwyer

The concept of fitness as a measure for a species's success in natural selection is central to the theory of evolution. We here investigate how reproduction rates which are not constant but vary in response to environmental fluctuations,…

种群与进化 · 定量生物学 2015-10-21 Anna Melbinger , Massimo Vergassola

Microbial communities are ubiquitous in nature and come in a multitude of forms, ranging from communities dominated by a handful of species to communities containing a wide variety of metabolically distinct organisms. This huge range in…

生物物理 · 物理学 2021-11-02 Amir Erez , Jaime G. Lopez , Yigal Meir , Ned S. Wingreen

Biodiversity and extinction are central issues in evolution. Dynamical balance among different species in ecosystems is often described by deterministic replicator equations with moderate success. However, fluctuations are inevitable,…

种群与进化 · 定量生物学 2014-11-25 Tsung-Cheng Lu , Yi-Ko Chen , Hsiu-Hau Lin , Chun-Chung-Chen

When can complex ecological interactions drive an entire ecosystem into a persistent non-equilibrium state, where species abundances keep fluctuating without going to extinction? We show that high-diversity spatially-extended systems, in…

种群与进化 · 定量生物学 2019-08-27 Felix Roy , Matthieu Barbier , Giulio Biroli , Guy Bunin

Understanding the coexistence of diverse species in a changing environment is an important problem in community ecology. Bet-hedging is a strategy that helps species survive in such changing environments. However, studies of bet-hedging…

生物物理 · 物理学 2023-01-18 Xiao Zhou , BingKan Xue

Phenotypes of individuals in a population of organisms are not fixed. Phenotypic fluctuations, which describe temporal variation of the phenotype of an individual or individual-to-individual variation across a population, are present in…

种群与进化 · 定量生物学 2018-08-15 Hong-Yan Shih , Harry Mickalide , David T. Fraebel , Nigel Goldenfeld , Seppe Kuehn

Environment plays a fundamental role in the competition for resources, and hence in the evolution of populations. Here, we study a well-mixed, finite population consisting of two strains competing for the limited resources provided by an…

种群与进化 · 定量生物学 2017-10-16 Karl Wienand , Erwin Frey , Mauro Mobilia

We conducted an investigation of the effect that extreme variability of the individual's environment has in the individual's adaptability and, in general, in the co-evolution of a population. First we assume that the individuals are a kind…

生物物理 · 物理学 2008-04-21 Juan G. Diaz Ochoa

Two mathematical models of macroevolution are studied. These models have population dynamics at the species level, and mutations and extinction of species are also included. The population dynamics are updated by difference equations with…

种群与进化 · 定量生物学 2014-04-16 Yohsuke Murase , Takashi Shimada , Nobuyasu Ito , Per Arne Rikvold

How diversity is maintained in natural ecosystems is a long-standing question in Theoretical Ecology. By studying a system that combines ecological dynamics, heterogeneous interactions and spatial structure, we uncover a new mechanism for…

种群与进化 · 定量生物学 2024-03-21 Giulia Garcia Lorenzana , Ada Altieri , Giulio Biroli
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