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相关论文: Computer Simulation of Host and two Parasite Speci…

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The death of a biological population is an extreme event which we investigate here for a host-parasitoid system. Our simulations using the Penna ageing model show how biological evolution can ``teach'' the parasitoids to avoid extinction by…

种群与进化 · 定量生物学 2009-11-13 Dietrich Stauffer , Ana Proykova , Karl-Heinz Lampe

The bit-string Penna Model is used to simulate the competition between an asexual parthenogenetic and a sexual population sharing the same environment. A new-born of either population can mutate and become a part of the other with some…

统计力学 · 物理学 2009-10-31 J. S. Sa' Martins

Can unicellular organisms survive a drastic temperature change, and adapt to it after many generations? In simulations of the Penna model of biological ageing, both extinction and adaptation were found for asexual and sexual reproduction as…

种群与进化 · 定量生物学 2007-05-23 D. Stauffer , H. Arndt

The sexual version of the Penna model of biological ageing, simulated since 1996, is compared here with alternative forms of reproduction as well as with models not involving ageing. In particular we want to check how sexual forms of life…

We introduce into the Penna Model for biological ageing one of the possible male mechanisms used to maximize the ability of their sperm to compete with sperm from other males. Such a selfish mechanism increases the male reproduction success…

凝聚态物理 · 物理学 2009-11-07 P. M. C de Oliveira , S. Moss de Oliveira

A host-parasite model is considered for a population of cells that can be of two types, A or B, and exhibits unilateral reproduction: while a B-cell always splits into two cells of the same type, the two daughter cells of an A-cell can be…

概率论 · 数学 2013-02-06 Gerold Alsmeyer , Sören Gröttrup

We are interested in modeling some two-level population dynamics, resulting from the interplay of ecological interactions and phenotypic variation of individuals (or hosts) and the evolution of cells (or parasites) of two types living in…

概率论 · 数学 2011-01-21 Sylvie Méléard , Sylvie Roelly

We perform simulations based on the Penna model for biological ageing, now with the purpose of studying sympatric speciation, that is, the division of a single species into two or more populations, reproductively isolated, but without any…

种群与进化 · 定量生物学 2007-05-23 K. Luz-Burgoa

The problem of evolutionary complexification of life is considered one of the fundamental aspects in contemporary evolutionary theory. Parasitism is ubiquitous, inevitable, and arises as soon as the first replicators appear, even during the…

分子网络 · 定量生物学 2024-01-01 Alexander Spirov

Aging, as defined in terms of the slope of the probability of death versus time (hazard curve), is a generic phenomenon observed in nearly all complex systems. Theoretical models of aging predict hazard curves that monotonically increase in…

生物物理 · 物理学 2023-12-20 Cagatay Eskin , Dervis C. Vural

This review deals with computer simulation of biological ageing, particularly with the Penna model of 1995.

种群与进化 · 定量生物学 2007-06-22 D. Stauffer

We twice modify the Penna model for biological ageing. First we introduce back (good) mutations and a memory for them into the model. It allows us to observe an improvement of the species fitness over long time scales as well as punctuated…

统计力学 · 物理学 2015-06-24 S. Moss de Oliveira , D. Stauffer , P. M. C de Oliveira , J. S. Sa Martins

The Penna model is a strategy to simulate the genetic dynamics of age-structured populations, in which the individuals genomes are represented by bit-strings. It provides a simple metaphor for the evolutionary process in terms of the…

种群与进化 · 定量生物学 2009-11-11 Veit Schwämmle , Suzana M. de Oliveira

Spatial patterning can be crucially important for understanding the behavior of interacting populations. Here we investigate a simple model of parasite and host populations in which parasites are random walkers that must come into contact…

种群与进化 · 定量生物学 2015-09-07 J. J. Dong , B. Skinner , N. Breecher , B. Schmittmann , R. K. P. Zia

To examine the co-evolution of quantitative traits in hosts and parasites, we present and study a co-evolutionary model of a social parasite-host system that incorporates (1) ecological dynamics that feed back into their co-evolutionary…

动力系统 · 数学 2015-05-19 Yun Kang , Jennifer Harrison Fewell

We have modified the sexual Penna model by introducing the fluctuating environment and fluctuations representing physiological functions of individuals. Additionally, we have introduced the mother care corresponding to the protection…

种群与进化 · 定量生物学 2008-11-04 Przemyslaw Biecek , Katarzyna Bonkowska , Stanislaw Cebrat

We generalize the standard Penna bit-string model of biological ageing by assuming that each deleterious mutation diminishes the survival probability in every time interval by a small percentage. This effect is added to the usual lethal but…

统计力学 · 物理学 2015-06-24 J. S. Sá Martins , D. Stauffer

Certain defense mechanisms of phages against the immune system of their bacterial host rely on cooperation of phages. Motivated by this example we analyse invasion probabilities of cooperative parasites in host populations that are…

种群与进化 · 定量生物学 2022-07-22 Vianney Brouard , Cornelia Pokalyuk

The standard Penna ageing model with sexual reproduction is enlarged by adding additional bit-strings for love: Marriage happens only if the male love strings are sufficiently different from the female ones. We simulate at what level of…

种群与进化 · 定量生物学 2015-05-19 D. Stauffer , S. Cebrat , T. J. P. Penna , A. O. Sousa

A square lattice is introduced into the Penna model for biological aging in order to study the evolution of diploid sexual populations under certain conditions when one single locus in the individual's genome is considered as identifier of…

种群与进化 · 定量生物学 2009-11-10 A. O. Sousa
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