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The mechanics of crawling cells on a substrate is investigated by using a minimal model that satisfies the force-free condition. A cell is described by two subcellular elements connected by a linear actuator that changes the length of the…

软凝聚态物质 · 物理学 2018-04-18 Mitsusuke Tarama , Ryoichi Yamamoto

Movements of molecular motors on cytoskeletal filaments are described by directed walks on a line. Detachment from this line is allowed to occur with a small probability. Motion in the surrounding fluid is described by symmetric random…

统计力学 · 物理学 2007-05-23 Theo M. Nieuwenhuizen , Stefan Klumpp , Reinhard Lipowsky

Biological systems, including human beings, have the innate ability to perform complex tasks in versatile and agile manner. Researchers in sensorimotor control have tried to understand and formally define this innate property. The idea,…

机器人学 · 计算机科学 2023-09-27 Matteo Saveriano , Fares J. Abu-Dakka , Aljaz Kramberger , Luka Peternel

The dynamics of motor protein molecules that have two subunits is investigated using simple discrete stochastic models. Exact steady-state analytical expressions are obtained for velocities and dispersions for any number of intermediate…

软凝聚态物质 · 物理学 2015-06-25 Anatoly B. Kolomeisky , Hubert Phillips

A spidernet is a graph obtained by adding large cycles to an almost regular tree and considered as an example having intermediate properties of lattices and trees in the study of discrete-time quantum walks on graphs. We introduce the…

量子物理 · 物理学 2015-06-05 Norio Konno , Nobuaki Obata , Etsuo Segawa

Microscopic Pedestrian Simulation Model is computer simulation model of pedestrian movement where every pedestrian in the model is treated as individual. Most of pedestrian researches have been done on macroscopic level, which does not…

多智能体系统 · 计算机科学 2016-09-08 Kardi Teknomo , Yasushi Takeyama , Hajime Inamura

Tethered particle motion is an experimental technique to monitor conformational changes in single molecules of DNA in real time, by observing the position fluctuations of a micrometer-size particle attached to the DNA. This article reviews…

定量方法 · 定量生物学 2007-10-05 Philip C Nelson

Animals locomote for various reasons: to search for food, find suitable habitat, pursue prey, escape from predators, or seek a mate. The grand scale of biodiversity contributes to the great locomotory design and mode diversity. Various…

计算机视觉与模式识别 · 计算机科学 2021-05-27 Soo Min Kang , Richard P. Wildes

The simplest model of a smart spatial redistribution of individuals is proposed. A single-species population is considered, to be composed of two discrete subpopulations inhabiting two stations; migration is a transfer between them. The…

种群与进化 · 定量生物学 2016-09-08 Michael Sadovsky

Diffusion of tracer particles in the cytoplasm of mammalian cells is often anomalous with a marked heterogeneity even within individual particle trajectories. Despite considerable efforts, the mechanisms behind these observations have…

生物物理 · 物理学 2020-08-05 Adal Sabri , Xinran Xu , Diego Krapf , Matthias Weiss

Like ordinary molecules are composed of atoms, colloidal molecules consist of several species of colloidal particles tightly bound together. If one of these components is self-propelled or swimming, novel "active colloidal molecules"…

软凝聚态物质 · 物理学 2018-05-23 Hartmut Löwen

Molecular biology is a nanotechnology that works--it has worked for billions of years and in an amazing variety of circumstances. At its core is a system for acquiring, processing and communicating information that is universal, from…

基因组学 · 定量生物学 2016-12-21 Apoorva D. Patel

One-dimensional hopping model is useful to describe the motion of microscopic particle in thermal noise environment, such as motor proteins. Recent experiments about the new generation of light-driven rotary molecular motors found that, the…

化学物理 · 物理学 2010-07-06 Yunxin Zhang

The self-propelled motion of microscopic bodies immersed in a fluid medium is studied using molecular dynamics simulation. The advantage of the atomistic approach is that the detailed level of description allows complete freedom in…

软凝聚态物质 · 物理学 2007-12-06 D. C. Rapaport

When addressing spatial biological questions using mathematical models, symmetries within the system are often exploited to simplify the problem by reducing its physical dimension. In a reduced-dimension model molecular movement is…

定量方法 · 定量生物学 2025-02-17 Natasha S. Savage

In this paper, three-dimensional numerical simulations of ballooning in spiders using multiple silk threads are performed using the discrete elastic rods method. The ballooning of spiders is hypothesised to be caused by the presence of the…

计算物理 · 物理学 2022-03-14 Charbel Habchi , Mohammad Khalid Jawed

In this letter, we adopt a new approach combining theoretical modeling with silk stretching measurements to explore the mystery of the structures between silkworm and spider silks, leading to the differences in mechanical response against…

生物物理 · 物理学 2009-02-23 Xiang Wu , Xiang-Yang Liu , Ning Du , Gang-Qin Xu , Bao-Wen Li

Particles with ligand-receptor contacts bind and unbind fluctuating "legs" to surfaces, whose fluctuations cause the particle to diffuse. Quantifying the diffusion of such "nanoscale caterpillars" is a challenge, since binding events often…

软凝聚态物质 · 物理学 2022-03-21 Sophie Marbach , Jeana Aojie Zheng , Miranda Holmes-Cerfon

Vesicles are soft elastic bodies with distinctive mechanical properties such as bending resistance, membrane fluidity, and their strong ability to deform, mimicking some properties of biological cells. While previous three-dimensional (3D)…

软凝聚态物质 · 物理学 2021-06-18 Jinming Lyu , Paul G. Chen , Alexander Farutin , Marc Jaeger , Chaouqi Misbah , and Marc Leonetti

Artificial nanowalkers are inspired by biomolecular counterparts from living cells, but remain far from comparable to the latter in design principles. The walkers reported to date mostly rely on chemical mechanisms to gain a direction; they…