相关论文: Capturing knots in polymers
This paper addresses the numerical simulation of self-piercing rivetting processes to join fibre reinforced polymers and sheet metals. Special emphasis is placed on the modelling of the deformation and failure behaviour of the composite…
This paper studies knots in three dimensional projective space. Our technique is to associate a virtual link to a link in projective space so that equivalent projective links go to equivalent virtual links (modulo a special flype move). We…
We introduce a relation of cobordism for knots in thickened surfaces and study cobordism invariants of such knots.
We apply the computational methodology of phase retrieval to the problem of folding heteropolymers. The ground state fold of the polymer is defined by the intersection of two sets in the configuration space of its constituent monomers: a…
A knot in a thickened surface $K$ is a smooth embedding $K:S^1 \rightarrow \Sigma \times [0,1]$, where $\Sigma$ is a closed, connected, orientable surface. There is a bijective correspondence between knots in $S^2 \times [0,1]$ and knots in…
We discuss the polynomial representation for long knots and elaborate on how to obtain them with a bound on degrees of the defining polynomials, for any knot-type.
We derive an algorithm for compression of the currents and varifolds representations of shapes, using ridge leverage score (RLS) sampling, and the theory of Nystrom approximation in Reproducing Kernel Hilbert Spaces. Our method is faster…
A knot is an an embedding of a circle into three-dimensional space. We say that a knot is unknotted if there is an ambient isotopy of the embedding to a standard circle. By representing knots via planar diagrams, we discuss the problem of…
The lectures review the state of affairs in modern branch of mathematical physics called probabilistic topology. In particular we consider the following problems: (i) We estimate the probability of a trivial knot formation on the lattice…
We make use of the previously developed formalism for a monomer ensemble and include angular dependence of the segments of the polymer chains thus described. In particular we show how to deal with stiffness when the polymer chain is…
We use the bond fluctuation model to study the contraction process of two polymer loops with $N$ segments that are connected each to the bottom and top part of a Feringa engine. The change in the size of the molecules as well as the folding…
We study the geometry of interacting knotted solitons. The interaction is local and advances either as a three-body or as a four-body process, depending on the relative orientation and a degeneracy of the solitons involved. The splitting…
The folding transition of biopolymers from the coil to compact structures has attracted wide research interest in the past and is well studied in polymer physics. Recent seminal works on DNA in confined devices have shown that these long…
The subject of this work is the adsorption transition of a long flexible self-avoiding polymer chain onto a rigid thin rod. The rod is represented by a cylinder of radius R with a short-ranged attractive surface potential for the chain…
This article provides an overview of relative strengths of polynomial invariants of knots and links, such as the Alexander, Jones, Homflypt, and Kaufman two-variable polynomial, Khovanov homology, factorizability of the polynomials, and…
Hydrodynamic interactions as modeled by Multi-Particle Collision Dynamics can dramatically influence the dynamics of fully flexible, ring-shaped polymers in ways not known for any other polymer architecture or topology. We show that steady…
This paper starts a systematic description of colored knot polynomials, beginning from the first non-(anti)symmetric representation R=[2,1]. The project involves several steps: (i) parametrization of big families of knots a la…
It is a major unsolved problem as to whether unknot recognition - that is, testing whether a given closed loop in R^3 can be untangled to form a plain circle - has a polynomial time algorithm. In practice, trivial knots (which can be…
Skeletonization extracts thin representations from images that compactly encode their geometry and topology. These representations have become an important topological prior for preserving connectivity in curvilinear structures, aiding…
We present a novel phenomenological theory describing how topological constraints in prime-knot ring polymers induce collective (cooperative) modes of motion. In low-complexity knots, chain segments can move quasi-independently. However, as…