Performance of group testing algorithms with near-constant tests-per-item
Abstract
We consider the nonadaptive group testing with N items, of which are defective. We study a test design in which each item appears in nearly the same number of tests. For each item, we independently pick L tests uniformly at random with replacement, and place the item in those tests. We analyse the performance of these designs with simple and practical decoding algorithms in a range of sparsity regimes, and show that the performance is consistently improved in comparison with standard Bernoulli designs. We show that our new design requires 23% fewer tests than a Bernoulli design when paired with the simple decoding algorithms known as COMP and DD. This gives the best known nonadaptive group testing performance for , and the best proven performance with a practical decoding algorithm for all . We also give a converse result showing that the DD algorithm is optimal for these designs when .
Keywords
Cite
@article{arxiv.1612.07122,
title = {Performance of group testing algorithms with near-constant tests-per-item},
author = {Oliver Johnson and Matthew Aldridge and Jonathan Scarlett},
journal= {arXiv preprint arXiv:1612.07122},
year = {2018}
}
Comments
16 pages, 2 figures. This work was presented in part at the 2016 IEEE International Symposium on Information Theory: arXiv:1602.03471