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This contribution is concerned with mathematical models for the dynamics of the genetic composition of populations evolving under recombination. Recombination is the genetic mechanism by which two parent individuals create the mixed type of…

Populations and Evolution · Quantitative Biology 2011-01-12 Ellen Baake

We apply a recently developed renormalization group (RG) method to study synchronization in a one-dimensional chain of phase-coupled oscillators in the regime of weak randomness. The RG predicts how oscillators with randomly distributed…

Statistical Mechanics · Physics 2011-04-06 Tony E. Lee , G. Refael , M. C. Cross , Oleg Kogan , Jeffrey L. Rogers

We consider a stochastic Laplacian growth problem in the framework of normal random matrices. In the large $N$ limit the support of eigenvalues of random matrices is a planar domain with a sharp boundary which evolves under a change in the…

Mathematical Physics · Physics 2023-12-01 Oleg Alekseev

We study in general the time-evolution of correlation functions in a extended quantum system after the quench of a parameter in the hamiltonian. We show that correlation functions in d dimensions can be extracted using methods of boundary…

Statistical Mechanics · Physics 2011-02-16 Pasquale Calabrese , John Cardy

Intracellular protein patterns are described by (nearly) mass-conserving reaction-diffusion systems. While these patterns initially form out of a homogeneous steady state due to the well-understood Turing instability, no general theory…

Pattern Formation and Solitons · Physics 2024-01-11 Henrik Weyer , Fridtjof Brauns , Erwin Frey

Uncovering and understanding universal dynamics in matter far from equilibrium remains a key challenge. In this work, we identify a so far unrecognized form of universal behavior that emerges after a sudden symmetry-breaking quench at…

Quantum Physics · Physics 2026-05-11 Tobias Wiener , Laurin Brunner , Markus Heyl

Cumulants and moments are closely related to the basic mathematics of continuous and discrete selection (respectively). These relationships generalize Fisher's fundamental theorem of natural selection and also make clear some of its…

Populations and Evolution · Quantitative Biology 2025-10-17 Hasan Ahmed , Deena Goodgold , Khushali Kothari , Rustom Antia

We use series expansions to study dynamics of equilibrium and non-equilibrium systems on networks. This analytical method enables us to include detailed non-universal effects of the network structure. We show that even low order…

Disordered Systems and Neural Networks · Physics 2009-11-11 M. B. Hastings

In this paper we investigate the universality and scaling properties of the well-known quantities in classical statistical mechanics near the quantum phase transition point. We show that transverse susceptibility and derivatives of…

Strongly Correlated Electrons · Physics 2015-03-17 R. Jafari

Understanding the inductive bias and generalization properties of large overparametrized machine learning models requires to characterize the dynamics of the training algorithm. We study the learning dynamics of large two-layer neural…

Machine Learning · Statistics 2025-10-30 Andrea Montanari , Pierfrancesco Urbani

Large multidimensionality of high-throughput datasets pertaining to cell signaling and gene regulation renders it difficult to extract mechanisms underlying the complex kinetics involving various biochemical compounds (e.g., proteins,…

Quantitative Methods · Quantitative Biology 2012-01-25 Michael Dworkin , Sayak Mukherjee , Ciriyam Jayaprakash , Jayajit Das

We consider conservative cross-diffusion systems for two species where individual motion rates depend linearly on the local density of the other species. We develop duality estimates and obtain stability and approximation results. We first…

Analysis of PDEs · Mathematics 2024-10-30 Vincent Bansaye , Ayman Moussa , Felipe Muñoz-Hernández

What are the structural determinants of protein sequence evolution? A number of site-specific structural characteristics have been proposed, most of which are broadly related to either the density of contacts or the solvent accessibility of…

Biological Physics · Physics 2017-01-31 Amir Shahmoradi , Claus Wilke

Originating from the pioneering study of Alan Turing, the bifurcation analysis predicting spatial pattern formation from a spatially uniform state for diffusing morphogens or chemical species that interact through nonlinear reactions is a…

Pattern Formation and Solitons · Physics 2023-01-18 Merlin Pelz , Michael J. Ward

Stochastic models of diffusion with excluded-volume effects are used to model many biological and physical systems at a discrete level. The average properties of the population may be described by a continuum model based on partial…

Chemical Physics · Physics 2012-12-20 Maria Bruna , S. Jonathan Chapman

We consider several one-species population dynamics model with finite and infinite carrying capacity, time dependent growth and effort rates and solve them analytically. We show that defining suitable scaling functions for a given time, one…

Disordered Systems and Neural Networks · Physics 2011-11-14 Alexandre Souto Martinez , Brenno Caetano Trocca Cabella , Fabiano Ribeiro

We characterize the identified sets of a wide range of stochastic choice models, including random utility, various models of boundedly-rational behavior, and dynamic discrete choice. In each of these settings, we show two distributions over…

Theoretical Economics · Economics 2026-02-24 Peter Caradonna , Christopher Turansick

We introduce a solvable model of randomly growing systems consisting of many independent subunits. Scaling relations and growth rate distributions in the limit of infinite subunits are analysed theoretically. Various types of scaling…

Physics and Society · Physics 2015-06-12 Misako Takayasu , Hayafumi Watanabe , Hideki Takayasu

Methods that generate networks sharing a given degree distribution and global clustering can induce changes in structural properties other than that controlled for. Diversity in structural properties, in turn, can affect the outcomes of…

Social and Information Networks · Computer Science 2018-09-18 Peter Overbury , István Z. Kiss , Luc Berthouze

We study a directed coupled map lattice model in two dimensions, with two degrees of freedom associated with each lattice site. The two freedoms are coupled at a fraction $c$ of lattice bonds acting as quenched random defects. In the case…

Condensed Matter · Physics 2009-10-28 Bosiljka Tadic , Ramakrishna Ramaswamy