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Error-correcting codes and related combinatorial constructs play an important role in several recent (and old) results in computational complexity theory. In this paper we survey results on locally-testable and locally-decodable…

Computational Complexity · Computer Science 2007-07-13 Luca Trevisan

Pattern matching can be used to calculate the support of patterns, and is a key issue in sequential pattern mining (or sequence pattern mining). Nonoverlapping pattern matching means that two occurrences cannot use the same character in the…

Databases · Computer Science 2022-09-08 Youxi Wu , Bojing Jian , Yan Li , He Jiang , Xindong Wu

Complex networks can often be decomposed into less complex sub-networks whose structures can give hints about the functional organization of the network as a whole. However, these structural motifs can only tell one part of the functional…

Molecular Networks · Quantitative Biology 2015-05-20 Jifeng Qian , Arend Hintze , Christoph Adami

This paper seeks to combine dictionary learning and hierarchical image representation in a principled way. To make dictionary atoms capturing additional information from extended receptive fields and attain improved descriptive capacity, we…

Computer Vision and Pattern Recognition · Computer Science 2019-11-11 Tong Zhang , Fatih Porikli

Image patch matching, which is the process of identifying corresponding patches across images, has been used as a subroutine for many computer vision and image processing tasks. State -of-the-art patch matching techniques take image patches…

Computer Vision and Pattern Recognition · Computer Science 2018-11-09 Akila Pemasiri , Kien Nguyen , Sridha Sridharan , Clinton Fookes

Classification and clustering have been studied separately in machine learning and computer vision. Inspired by the recent success of deep learning models in solving various vision problems (e.g., object recognition, semantic segmentation)…

Machine Learning · Computer Science 2017-12-13 Ali Borji , Aysegul Dundar

The concept of decomposition in computer science and engineering is considered a fundamental component of computational thinking and is prevalent in design of algorithms, software construction, hardware design, and more. We propose a simple…

Logic in Computer Science · Computer Science 2023-06-22 Dror Fried , Axel Legay , Joël Ouaknine , Moshe Y. Vardi

A new numerical characterization of symbolic sequences is proposed. The partition of sequence based on Ke and Tong algorithm is a starting point. Algorithm decomposes original sequence into set of distinct subsequences - a patterns. The set…

Quantitative Methods · Quantitative Biology 2011-09-08 B. Kozarzewski

While there has been a plethora of approaches for detecting disjoint communities from real-world complex networks, some methods for detecting overlapping community structures have also been recently proposed. In this work, we argue that,…

Social and Information Networks · Computer Science 2018-08-21 Tanmoy Chakraborty , Saptarshi Ghosh , Noseong Park

We propose a simple decoding algorithm for CSS codes taking into account the correlations between the X part and the Z part of the error. Applying this idea to surface codes, we derive an improved version of the perfect matching decoding…

Information Theory · Computer Science 2016-11-29 Nicolas Delfosse , Jean-Pierre Tillich

Many standard structural quantities, such as order parameters and correlation functions, exist for common condensed matter systems, such as spherical and rod-like particles. However, these structural quantities are often insufficient for…

Soft Condensed Matter · Physics 2012-01-18 Aaron S. Keys , Christopher R. Iacovella , Sharon C. Glotzer

Neural manifolds summarize the intrinsic structure of the information encoded by a population of neurons. Advances in experimental techniques have made simultaneous recordings from multiple brain regions increasingly commonplace, raising…

Neurons and Cognition · Quantitative Biology 2025-03-27 Iris H. R. Yoon , Gregory Henselman-Petrusek , Yiyi Yu , Robert Ghrist , Spencer LaVere Smith , Chad Giusti

This work is motivated by the mostly unsolved task of parsing biological images with multiple overlapping articulated model organisms (such as worms or larvae). We present a general approach that separates the two main challenges associated…

Computer Vision and Pattern Recognition · Computer Science 2016-12-20 Victor Yurchenko , Victor Lempitsky

A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex…

Other Quantitative Biology · Quantitative Biology 2014-03-12 Jian-Jun Shu , Li Shan Ouw

This work investigates the accuracy and numerical stability of CUR decompositions with oversampling. The CUR decomposition approximates a matrix using a subset of columns and rows of the matrix. When the number of columns and the rows are…

Numerical Analysis · Mathematics 2025-04-01 Taejun Park , Yuji Nakatsukasa

We present a novel way to encode compositional information in high-dimensional (HD) vectors. Inspired by chromosomal crossover, random HD vectors are recursively interwoven, with a fraction of one vector's components masked out and replaced…

Neurons and Cognition · Quantitative Biology 2019-11-18 Rich Pang

A novel non-linear approach to fast and effective comparison of sequences is presented, compared to the traditional cross-correlation operator, and illustrated with respect to DNA sequences.

Computer Vision and Pattern Recognition · Computer Science 2007-05-23 Luciano da Fontoura Costa

We review some important ideas in the design and analysis of robust overlapping domain decomposition algorithms for high-contrast multiscale problems and propose a domain decomposition method better performance in terms of the number of…

Numerical Analysis · Mathematics 2017-05-26 Juan Galvis , Eric Chung , Yalchin Efendiev , Wing Tat Leung

The detection of overlapping communities is a challenging problem which is gaining increasing interest in recent years because of the natural attitude of individuals, observed in real-world networks, to participate in multiple groups at the…

Social and Information Networks · Computer Science 2014-11-17 Alessia Amelio , Clara Pizzuti

Efficient and accurate decoding of quantum error-correcting codes is essential for fault-tolerant quantum computation, however, it is challenging due to the degeneracy of errors, the complex code topology, and the large space for logical…

Quantum Physics · Physics 2025-03-28 Hanyan Cao , Feng Pan , Dongyang Feng , Yijia Wang , Pan Zhang