Pairwise alignment of the DNA sequence using hypercomplex number representation
Other Quantitative Biology
2014-03-12 v1
Abstract
A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and incorporated with the method of dot matrix analysis and various algorithms of sequence alignment. The problem of DNA sequence alignment can be processed in a rather similar way as pairwise alignment of protein sequence.
Cite
@article{arxiv.1403.2658,
title = {Pairwise alignment of the DNA sequence using hypercomplex number representation},
author = {Jian-Jun Shu and Li Shan Ouw},
journal= {arXiv preprint arXiv:1403.2658},
year = {2014}
}