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We exploit a simple one-dimensional trapping model introduced before, prompted by the problem of ion current across a biological membrane. The voltage-sensitive channels are open or closed depending on the value taken by an external…

Statistical Mechanics · Physics 2009-11-07 J. A. Revelli , A. D. Sanchez , H. S. Wio

The paradigm of layered networks is used to describe many real-world systems -- from biological networks, to social organizations and transportation systems. Recently there has been much progress in understanding the general properties of…

Physics and Society · Physics 2016-10-05 Márton Pósfai , Jianxi Gao , Sean P. Cornelius , Albert-László Barabási , Raissa M. D'Souza

In multiuser multiple-input multiple-output (MU-MIMO) systems, channel correlation is detrimental to system performance. We demonstrate that widely used, yet overly simplified, correlation models that generate identical correlation profiles…

Many ion channels spontaneously switch between different levels of activity. Although this behaviour known as modal gating has been observed for a long time it is currently not well understood. Despite the fact that appropriately…

Quantitative Methods · Quantitative Biology 2018-08-14 Ivo Siekmann , Mark Fackrell , Edmund J. Crampin , Peter Taylor

A waveform channel is considered where the transmitted signal is corrupted by Wiener phase noise and additive white Gaussian noise. A discrete-time channel model that takes into account the effect of filtering on the phase noise is…

Information Theory · Computer Science 2017-08-15 Hassan Ghozlan , Gerhard Kramer

In this paper, we study the information-theoretic limits of oblivious transfer via noisy channels. We also investigate oblivious transfer over a noisy multiple-access channel with two non-colluding senders and a single receiver. The channel…

Information Theory · Computer Science 2025-12-23 Hadi Aghaee , Bahareh Akhbari , Christian Deppe

The capacity of a point-to-point discrete-time multi-input-multiple-output (MIMO) channel with phase uncertainty (MIMO phase noise channel) is still open. As a matter of fact, even the pre-log (multiplexing gain) of the capacity in the high…

Information Theory · Computer Science 2016-11-09 Sheng Yang , Shlomo Shamai

Changes in a cell's external or internal conditions are usually reflected in the concentrations of the relevant transcription factors. These proteins in turn modulate the expression levels of the genes under their control and sometimes need…

Molecular Networks · Quantitative Biology 2013-08-01 Gasper Tkacik , Curtis G Callan , William Bialek

Experiments on single ionic channels have contributed to a large extent to our current view on the function of cell membrane. In these experiments the main observables are the physical quantities: ionic concentration, membrane electrostatic…

Biological Physics · Physics 2018-04-17 Laureano Ramírez-Piscina , José M. Sancho

The phenomenon of Euclidean resonance (a strong enhancement of quantum tunneling through a nonstationary potential barrier) is applied to disintegration of atoms and molecules through tunnel barriers formed by applied constant and…

Quantum Physics · Physics 2007-05-23 B. Ivlev

A discrete rate theory for general multi-ion channels is presented, in which the continuous dynamics of ion diffusion is reduced to transitions between Markovian discrete states. In an open channel, the ion permeation process involves three…

Biological Physics · Physics 2012-06-29 Wan Chen , Radek Erban , S. Jonathan Chapman

We consider the problem of coding for the substring channel, in which information strings are observed only through their (multisets of) substrings. Due to existing DNA sequencing techniques and applications in DNA-based storage systems,…

Information Theory · Computer Science 2024-03-27 Yonatan Yehezkeally , Nikita Polyanskii

Entanglement behavior for different classes of two qubit systems passing through a generalized amplitude damping channel is discussed. The phenomena of sudden single, double changes and the sudden death of entanglement are reported for…

Quantum Physics · Physics 2015-06-18 Nasser Metwally

The intensity-dependent resonance-like enhancement phenomenon in high-order above-threshold ionization spectrum is a typical quantum effect for atoms or molecules in the intense laser field, which has not been well understood. The…

Atomic Physics · Physics 2019-06-28 Long Xu , Libin Fu

Multi-channel wireless systems have become a standard solution to address our information society's ever-increasing demand for more information transfer. The ultimate bound on the capacity such systems can achieve is the limited channel…

Applied Physics · Physics 2019-01-17 Philipp del Hougne , Mathias Fink , Geoffroy Lerosey

Mass action type deterministic kinetic models of ion channels are usually constructed in such a way as to obey the principle of detailed balance (or, microscopic reversibility) for two reasons: first, the authors aspire to have models…

Molecular Networks · Quantitative Biology 2011-09-21 I. Nagy , J. Tóth

Ion transport through biological and solid-state nanochannels is known to be a highly noisy process. The power spectrum of current fluctuations is empirically known to scale like the inverse of frequency, following the long-standing yet…

Soft Condensed Matter · Physics 2023-03-22 Paul Robin , Mathieu Lizée , Qian Yang , Théo Emmerich , Alessandro Siria , Lydéric Bocquet

Transmission through disordered samples can be controlled by illuminating a sample with waveforms corresponding to the eigenchannels of the transmission matrix. But can the TM be exploited to selectively excite quasi-normal modes and so…

Classical Physics · Physics 2018-11-21 Matthieu Davy , Azriel Z. Genack

Computation of biological processes creates great promise for everyday life and great challenges for physical scientists. Simulations of molecular dynamics appeal to biologists as a natural extension of structural biology. Once biologists…

Biomolecules · Quantitative Biology 2019-03-05 Bob Eisenberg

We show that multiplexing allows to control noise-induced dynamics of multilayer networks in the regime of stochastic resonance. We illustrate this effect on an example of two- and multi-layer networks of bistable overdamped oscillators. In…

Adaptation and Self-Organizing Systems · Physics 2023-01-04 Vladimir V. Semenov , Anna Zakharova
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