English
Related papers

Related papers: Disorder in DNA-Linked Gold Nanoparticle Assemblie…

200 papers

We theoretically investigated the temperature fluctuations of DNA close to denaturation and observed a strong enhancement of these fluctuations at the critical temperature. Although in a much lower frequency range, such a sharp increase was…

Biological Physics · Physics 2011-11-10 Marc Joyeux , Sahin Buyukdagli , Michael Sanrey

Coexistence of mutually influencing ferroelectric and magnetic ordering at low temperature in hexagonal phase of rare-earth manganites gives rise to interesting physical phenomena. Here, we report a detailed analysis of powder neutron…

Materials Science · Physics 2014-05-13 A. K. Singh , S. D. Kaushik , V. Siruguri , S. Patnaik

We discuss the effects of external stress on the thermal denaturation of homogeneous DNA. Pulling double-stranded DNA at each end exerts a profound effect on the thermal denaturation, or melting, of a long segment of this molecule. We…

Soft Condensed Matter · Physics 2009-11-13 Joseph Rudnick , Tatiana Kuriabova

Recent advances in the understanding of the melting behavior of double-stranded DNA with statistical mechanics methods lead to improved estimates of the weight factors for the dissociation events of the chains, in particular for interior…

Statistical Mechanics · Physics 2009-11-07 Ralf Blossey , Enrico Carlon

Disorder effects on the density of states and electronic conduction in metallic carbon nanotubes are analyzed by a tight binding model with Gaussian bond disorder. Metallic armchair and zigzag nanotubes are considered. We obtain a…

Condensed Matter · Physics 2015-06-25 K. Harigaya

We investigate the effect of electron-phonon coupling on low temperature phases in metallic single-wall carbon nanotubes. We obtain low-temperature phase diagrams of armchair and zigzag type nanotubes with screened interactions with a…

Strongly Correlated Electrons · Physics 2018-11-14 Junichi Okamoto , Ludwig Mathey , Wen-Min Huang

In this article, the Curie-Weiss type behavior and the appearance of an "interaction" or "ordering" temperature for a collection of magnetic nanoparticles is explored theoretically. We show that some systems where an interaction temperature…

Materials Science · Physics 2024-10-25 Robert E Camley , Rair Macêdo , Karen L Livesey

The strange metal behavior, usually characterized by a linear-in-temperature (T) resistivity, is a still unsolved mystery in solid-state physics. Usually it is associated with the proximity to a quantum critical point (a second order…

Strongly Correlated Electrons · Physics 2022-05-24 M. Grilli , C. Di Castro , G. Seibold , S. Caprara

We discuss the question of the generation of topological defects (dislocations) by quenched disorder in two dimensional periodic systems. In a previous study [Phys. Rev. B {\bf 52} 1242 (1995)] we found that, contrarily to $d=3$, unpaired…

Condensed Matter · Physics 2009-10-31 Pierre Le Doussal , Thierry Giamarchi

Just like atoms combine into molecules, colloids can self-organize into predetermined structures according to a set of design principles. Controlling valence -- the number of inter-particle bonds -- is a prerequisite for the assembly of…

Soft Condensed Matter · Physics 2022-01-05 Angus McMullen , Sascha Hilgenfeldt , Jasna Brujic

The melting transition of deoxyribonucleic acid (DNA), whereby the strands of the double helix structure completely separate at a certain temperature, has been characterized using neutron scattering. A Bragg peak from B-form fibre DNA has…

We have recently suggested that the probability for the formation of thermally activated DNA bubbles is, to a very good approximation, proportional to the number of soft AT pairs over a length L(n) that depend on the size $n$ of the bubble…

Soft Condensed Matter · Physics 2007-05-23 Z. Rapti , A. Smerzi , K. O. Rasmussen , A. R. Bishop , C. H. Choi , A. Usheva

Studies of how protein fold have shown that the way protein clumps form in the test tube is similar to how proteins form the so-called ``amyloid'' deposits that are the pathological signal of a variety of diseases, among them the memory…

Condensed Matter · Physics 2009-10-31 R. A. Broglia , G. Tiana , S. Pasquali , H. E. Roman , E. Vigezzi

We investigate diffusion-limited reactions between a diffusing particle and a target site on a semiflexible polymer, a key factor determining the kinetics of DNA-protein binding and polymerization of cytoskeletal filaments. Our theory…

Soft Condensed Matter · Physics 2010-12-08 Yann von Hansen , Roland R. Netz , Michael Hinczewski

We present an extensive theoretical investigation of the mechanical unzipping of double-stranded DNA under the influence of an applied force. In the limit of long polymers, there is a thermodynamic unzipping transition at a critical force…

Soft Condensed Matter · Physics 2009-11-07 David K. Lubensky , David R. Nelson

The emergence of longer information-carrying and functional nucleotide polymers from random short strands was a major stepping stone at the dawn of life. But the formation of those polymers under temperature oscillation required some form…

Biological Physics · Physics 2020-08-19 Patrick W. Kudella , Alexei V. Tkachenko , Sergei Maslov , Dieter Braun

Goldstone's theorem and its extension to pseudo-Goldstone (PG) modes have profound implications across diverse areas of physics, from quantum chromodynamics to quantum magnetism. PG modes emerge from accidental degeneracies lifted by…

Strongly Correlated Electrons · Physics 2025-05-13 Xiyue Lin , Tao Shi

DNA is an astonishing material that can be used as a molecular building block to construct periodic arrays and devices with nanoscale accuracy and precision. Here, we present simple bead-spring model of DNA nanostars having three, four and…

Soft Condensed Matter · Physics 2021-10-22 Supriyo Naskar , Dhiraj Bhatia , Shiang-Tai Lin , Prabal K. Maiti

We develop further a statistical model coupling denaturation and chain conformations in DNA (Palmeri J, Manghi M and Destainville N 2007 Phys. Rev. Lett. 99 088103). Our Discrete Helical Wormlike Chain model takes explicitly into account…

Soft Condensed Matter · Physics 2010-06-22 Manoel Manghi , John Palmeri , Nicolas Destainville

We explain the strong interlayer drag resistance observed at low temperatures in bilayer electron-hole systems in terms of an interplay between local electron-hole-pair condensation and disorder-induced carrier density variations. Smooth…

Mesoscale and Nanoscale Physics · Physics 2021-10-20 Hong Liu , Allan H. MacDonald , Dmitry K. Efimkin