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Concentrated solutions of short blunt-ended DNA duplexes, down to 6 base pairs, are known to order into the nematic liquid crystal phase. This self-assembly is due to the stacking interactions between the duplex terminals that promotes…

Soft Condensed Matter · Physics 2015-05-30 Cristiano De Michele , Tommaso Bellini , Francesco Sciortino

The dielectrophoresis method for trapping and attaching nanoscale double-stranded DNA between nanoelectrodes was developed. The method gives a high yield of trapping single or a few molecules only which enables transport measurements at the…

Soft Condensed Matter · Physics 2007-05-23 S. Tuukkanen , A. Kuzyk , J. J. Toppari , V. P. Hytonen , T. Ihalainen , P. Torma

We present numerical results on the temperature dependence of the distribution of bubble lengths in DNA segments of various guanine-cytosine (GC) concentrations. Base-pair openings are described by the Peyrard-Bishop-Dauxois model and the…

Biomolecules · Quantitative Biology 2009-06-26 G. Kalosakas , S. Ares

We present the electrical transport characteristics of a batch of nano-crystalline diamond films of varying nitrogen concentrations and explain the conduction mechanism by the disordered quasi-superlattice model applied to semiconductor…

Mesoscale and Nanoscale Physics · Physics 2015-06-05 George Chimowa , Dimitry Churochkin , Somnath Bhattacharyya

Phase separation in biomolecular mixtures can result from multiple physical interactions, which may act either complementarily or antagonistically. In the case of protein-nucleic acid mixtures, charge plays a key role but can have…

Soft Condensed Matter · Physics 2026-05-13 Gabrielle R. Abraham , Tianhao Li , Anna Nguyen , William M. Jacobs , Omar A. Saleh

We study the influence of quenched disorder on the two-dimensional melting behavior by using both video-microscopy of superparamagnetic colloidal particles and computer simulations of repulsive parallel dipoles. Quenched disorder is…

Soft Condensed Matter · Physics 2015-06-16 Sven Deutschländer , Tobias Kruppa , Hartmut Löwen , Georg Maret , Peter Keim

Negatively charged DNA can be compacted by positively charged dendrimers and the degree of compaction is a delicate balance between the strength of the electrostatic interaction and the elasticity of DNA. We report various elastic…

Biological Physics · Physics 2013-07-25 Santosh Mogurampelly , Bidisha Nandy , Roland R. Netz , Prabal K. Maiti

The presence of nonmagnetic impurities in a 2D ``bad metal'' depresses the superconducting Berezinskii-Kosterlitz-Thouless transition temperature, while leaving the pairing energy scale unchanged. Thus the region of the pseudogap…

Superconductivity · Physics 2009-10-31 Vadim M. Loktev , Rachel M. Quick , Sergei G. Sharapov

We consider thermal transport in low-dimensional disordered harmonic networks of coupled masses. Utilizing known results regarding Anderson localization, we derive the actual dependence of the thermal conductance $G$ on the length $L$ of…

Disordered Systems and Neural Networks · Physics 2016-07-05 Isaac Weinberg , Yaron de Leeuw , Tsampikos Kottos , Doron Cohen

We study the influence of a structural disorder on the thermodynamical properties of 2D-elastic chains submitted to mechanical/topological constraint as loops. The disorder is introduced via a spontaneous curvature whose distribution along…

Genomics · Quantitative Biology 2007-10-25 Cédric Vaillant , Benjamin Audit , Alain Arnéodo

The effect of magnesium ion Mg2+ on the dielectric relaxation of semidilute DNA aqueous solutions has been studied by means of dielectric spectroscopy in the 100 Hz-100 MHz frequency range. De Gennes-Pfeuty-Dobrynin semidilute solution…

Biological Physics · Physics 2013-11-20 Danijel Grgičin , Sanja Dolanski Babić , Tomislav Ivek , Silvia Tomić , Rudi Podgornik

Annealing of crystalline multilayers composed of two miscible elements usually causes interfacial mixing of the constituent atoms, possibly leading to the formation of binary alloys at the interfaces. Magnetron sputtered c-Ni/a-Zr…

Materials Science · Physics 2021-10-01 Debarati Bhattacharya , Vijay Karki , Surendra Singh , T. V. Chandrasekhar Rao

We introduce a combined Restrained MD/Parallel Tempering approach to study the difference in free energy as a function of a set of collective variables between two states in presence of unknown slow degrees of freedom. We applied this…

Statistical Mechanics · Physics 2015-03-19 Simone Meloni , Sergio Orlandini , Giovanni Ciccotti

We evaluate, by means of molecular dynamics simulations employing a realistic DNA coarse-grained model, the phase behaviour and the structural and dynamic properties of tetravalent DNA nanostars, i.e. nanoconstructs completely made of DNA.…

Soft Condensed Matter · Physics 2014-10-01 Lorenzo Rovigatti , Francesca Bomboi , Francesco Sciortino

We investigate the impact of structural disorder on electronic transport in gold nanocrystal monolayers. Arrays ranging from void-filled networks to well-ordered superlattices show clear voltage thresholds V_T due to Coulomb blockade, and…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 Raghuveer Parthasarathy , Xiao-Min Lin , Heinrich M. Jaeger

We study the phase behavior of random heteropolymers (RHPs) with quenched cross-links, a novel polymer class of technological and biological relevance, and show the possible occurrence of freezing with few chain conformations sampled. The…

Statistical Mechanics · Physics 2009-10-31 L. Gutman , E. I. Shakhnovich

The crystal structure, magnetic ground state, and the temperature dependent microscopic spin-spin correlations of the frustrated honeycomb lattice antiferromagnet Na2Co2TeO6 have been investigated by powder neutron diffraction. A three…

Strongly Correlated Electrons · Physics 2017-03-29 A. K. Bera , S. M. Yusuf , Amit Kumar , C. Ritter

By using dielectric spectroscopy in a broad range of temperatures and frequencies, we have investigated dipolar relaxations, the dc conductivity, and the possible occurrence of polar order in AgCN. Conductivity contributions dominate the…

Disordered Systems and Neural Networks · Physics 2023-05-09 P. Lunkenheimer , A. Loidl , G. P. Johari

The stability of DNA molecule during the encapsulation process is a topic of intense research. We study the thermal stability of the double-stranded DNA molecule of different lengths in a confined space. Using a statistical model we…

Soft Condensed Matter · Physics 2020-02-04 Arghya Maity , Navin Singh

We study the effects of quenched disorder on electrons in a 3D nodal-line semimetal. Disorder leads to significant renormalisations of the quasiparticle properties due to ultraviolet processes, i.e., processes of scattering in a large band…

Mesoscale and Nanoscale Physics · Physics 2023-10-31 Siyu Zhu , Sergey Syzranov