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Comparative analyses of phylogenetic trees typically require identical taxon sets, however, in practice, trees often include distinct but overlapping taxa. Pruning non-shared leaves discards phylogenetic signal, whereas tree completion can…

Populations and Evolution · Quantitative Biology 2026-04-28 Aleksandr Koshkarov , Nadia Tahiri

Large language models (LLMs) are increasingly used as generators in iterative neural architecture search (NAS), yet no formal convergence theory exists for this class of algorithms. We model iterative LLM-NAS as a parametric Cross-Entropy…

Machine Learning · Computer Science 2026-05-29 Santosh Premi Adhikari , Radu Timofte , Dmitry Ignatov

Suppose we have n keys, n access probabilities for the keys, and n+1 access probabilities for the gaps between the keys. Let h_min(n) be the minimal height of a binary search tree for n keys. We consider the problem to construct an optimal…

Data Structures and Algorithms · Computer Science 2010-11-08 Peter Becker

In this paper, we consider the problem of compressing a trie while supporting the powerful \emph{locate} queries: to return the pre-order identifiers of all nodes reached by a path labeled with a given query pattern. Our result builds on…

Data Structures and Algorithms · Computer Science 2020-12-18 Nicola Prezza

In the \emph{trace reconstruction problem}, an unknown source string $x \in \{0,1\}^n$ is transmitted through a probabilistic \emph{deletion channel} which independently deletes each bit with some fixed probability $\delta$ and concatenates…

Data Structures and Algorithms · Computer Science 2020-12-09 Xi Chen , Anindya De , Chin Ho Lee , Rocco A. Servedio , Sandip Sinha

Large language models (LLMs) have been garnering increasing attention in the recommendation community. Some studies have observed that LLMs, when fine-tuned by the cross-entropy (CE) loss with a full softmax, could achieve…

Information Retrieval · Computer Science 2024-08-27 Cong Xu , Zhangchi Zhu , Mo Yu , Jun Wang , Jianyong Wang , Wei Zhang

In this paper, we study learning and testing decision tree of size and depth that are significantly smaller than the number of attributes $n$. Our main result addresses the problem of poly$(n,1/\epsilon)$ time algorithms with…

Data Structures and Algorithms · Computer Science 2021-08-11 Nader H. Bshouty , Catherine A. Haddad-Zaknoon

A layerwise search in a split-by-edges tree (as defined by Br{\ae}ndeland, 2015) of agiven graph produces a maximum independent set in exponential time. A depth-first search produces an independent set, which may or may not be a maximum, in…

Data Structures and Algorithms · Computer Science 2015-05-06 Asbjørn Brændeland

This paper introduces a new paradigm for minimax game-tree search algo- rithms. MT is a memory-enhanced version of Pearls Test procedure. By changing the way MT is called, a number of best-first game-tree search algorithms can be simply and…

Artificial Intelligence · Computer Science 2014-04-08 Aske Plaat , Jonathan Schaeffer , Wim Pijls , Arie de Bruin

In recent years, significant progress has been made on algorithms for learning optimal decision trees, primarily in the context of binary features. Extending these methods to continuous features remains substantially more challenging due to…

Machine Learning · Computer Science 2026-01-22 Harold Kiossou , Pierre Schaus , Siegfried Nijssen

Efficiently word storing and searching is an important task in computer science. An application space complexity, time complexity, and overall performance depend on this string data. Many word searching data structures and algorithms exist…

Data Structures and Algorithms · Computer Science 2019-11-06 Rahat Yeasin Emon , Sharmistha Chanda Tista

In this work we introduce a new linear time compression algorithm, called "Re-pair for Trees", which compresses ranked ordered trees using linear straight-line context-free tree grammars. Such grammars generalize straight-line context-free…

Data Structures and Algorithms · Computer Science 2010-08-02 Markus Lohrey , Sebastian Maneth , Roy Mennicke

Offering rich contexts to Large Language Models (LLMs) has shown to boost the performance in various tasks, but the resulting longer prompt would increase the computational cost and might exceed the input limit of LLMs. Recently, some…

Computation and Language · Computer Science 2025-09-30 Wenhao Mao , Chengbin Hou , Tianyu Zhang , Xinyu Lin , Ke Tang , Hairong Lv

In this paper we investigate the problem of partitioning an input string T in such a way that compressing individually its parts via a base-compressor C gets a compressed output that is shorter than applying C over the entire T at once.…

Data Structures and Algorithms · Computer Science 2009-06-26 Paolo Ferragina , Igor Nitto , Rossano Venturini

Levin Tree Search (LTS) is a search algorithm that makes use of a policy (a probability distribution over actions) and comes with a theoretical guarantee on the number of expansions before reaching a goal node, depending on the quality of…

Machine Learning · Computer Science 2024-11-13 Laurent Orseau , Marcus Hutter , Levi H. S. Lelis

Randomly initialized dense networks contain subnetworks that achieve high accuracy without weight learning--strong lottery tickets (SLTs). Recently, Gadhikar et al. (2023) demonstrated that SLTs could also be found within a randomly pruned…

In grammar-based compression a string is represented by a context-free grammar, also called a straight-line program (SLP), that generates only that string. We refine a recent balancing result stating that one can transform an SLP of size…

Data Structures and Algorithms · Computer Science 2021-07-02 Moses Ganardi

Partial search has been proposed recently for finding the target block containing a target element with fewer queries than the full Grover search algorithm which can locate the target precisely. Since such partial searches will likely be…

Quantum Physics · Physics 2010-05-24 Byung-Soo Choi , Thomas A. Walker , Samuel L. Braunstein

Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…

Data Structures and Algorithms · Computer Science 2016-09-01 Shouhei Fukunaga , Yoshimasa Takabatake , I Tomohiro , Hiroshi Sakamoto

We study maximal clades in random phylogenetic trees with the Yule-Harding model or, equivalently, in binary search trees. We use probabilistic methods to reprove and extend earlier results on moment asymptotics and asymptotic normality. In…

Probability · Mathematics 2014-08-28 Svante Janson