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Related papers: Replica field theory for a polymer in random media

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We proposed a probabilistic algorithm to solve the Multiple Sequence Alignment problem. The algorithm is a Simulated Annealing (SA) that exploits the representation of the Multiple Alignment between $D$ sequences as a directed polymer in…

Genomics · Quantitative Biology 2016-08-16 M. Hernández-Guía , R. Mulet , S. Rodríguez-Pérez

In this article we study a \emph{non-directed} polymer model in dimension $d\ge 2$: we consider a simple symmetric random walk on $\mathbb{Z}^d$ which interacts with a random environment, represented by i.i.d. random variables…

Probability · Mathematics 2022-09-26 Quentin Berger , Niccolò Torri , Ran Wei

The replica method for a quenched disordered system is considered in a perturbative field theory. Since correction in a finite-order perturbation is given in a polynomial of the replica number $n$, the zero-replica limit $n \to 0$ is…

Disordered Systems and Neural Networks · Physics 2009-01-13 Hisamitsu Mukaida , Yoshinori Sakamoto

We study the problem of adsorption and collapse transition of a linear polymer chain situated in a fractal container represented by a 4-simplex lattice and interacting with a surface adsorbed linear polymer chain. The adsorbed chain…

Statistical Mechanics · Physics 2009-10-31 Sanjay Kumar , Yashwant Singh

We analyse bead--spring polymers coupled to Navier--Stokes turbulence in ultra--dilute solutions at Weissenberg number \(Wi\approx 80\). The polymers do not alter the large-scale turbulent structure, but hydrodynamic interactions generate…

Fluid Dynamics · Physics 2026-05-26 Demosthenes Kivotides

We study the continuum field theory for an ensemble of directed polymers r_i (t) in 1+d' dimensions that live in a medium with quenched point disorder and interact via short-ranged pair forces g \Psi (r_i - r_j). In the strong-disorder (or…

Condensed Matter · Physics 2007-05-23 Harald Kinzelbach , Michael Lassig

In this paper, we study the so-called intermediate disorder regime for a directed polymer in a random environment with heavy-tail. Consider a simple symmetric random walk $(S_n)_{n\geq 0}$ on $\mathbb{Z}^d$, with $d\geq 1$, and modify its…

Probability · Mathematics 2021-04-28 Quentin Berger , Hubert Lacoin

Force versus extension curves measure entropic elasticity of single polymer chain in force spectroscopy experiments. A Worm-like Chain model is used to describe force extension experiments with an intrinsic chain parameter called…

Soft Condensed Matter · Physics 2021-07-28 Vikhyaat Ahlawat , Shatruhansingh Rajput , Shivprasad Patil

We present simulation results for single a-thermal chain polymers in finite volumes. For this we use a recently proposed recursive implementation of the enrichment method. In 3 dimensions it allows the simulation of extremely long chains…

Condensed Matter · Physics 2009-10-22 Peter Grassberger , Rainer Hegger

We develop a segment-scale, force-based theory for the breakdown of the unentangled Rouse model and subsequent emergence of isotropic mesoscopic localization and entropic elasticity in chain polymer liquids in the absence of…

Soft Condensed Matter · Physics 2017-04-26 Zachary E. Dell , Kenneth S. Schweizer

We consider the escape of a flexible, self-avoiding polymer chain out of a confined geometry. By means of simulations, we demonstrate that the translocation time can be described by a simple scaling law that exhibits a nonlinear dependence…

Soft Condensed Matter · Physics 2009-11-11 Angelo Cacciuto , Erik Luijten

We investigate the statistical properties of a randomly branched 3--functional $N$--link polymer chain without excluded volume, whose one point is fixed at the distance $d$ from the impenetrable surface in a 3--dimensional space. Exactly…

Statistical Mechanics · Physics 2009-11-10 M. V. Tamm , S. K. Nechaev , I. Ya. Erukhimovich

We consider the lattice model for an ideal-linear polymer chain to mimic the conformations of the semi-flexible homo-polymer chain. The polymer chain is assumed to confine in the fairly small area, such that the flexible chain conformations…

Soft Condensed Matter · Physics 2020-10-23 Pramod Kumar Mishra

We consider the rupture dynamics of a homopolymer chain pulled at one end at a constant loading rate. Our model of the breakable polymer is related to the Rouse chain, with the only difference that the interaction between the monomers is…

Soft Condensed Matter · Physics 2009-10-29 S. Fugmann , I. M. Sokolov

We consider the log-Gamma polymer in the half-space with bulk weights distributed as $\operatorname{Gamma}^{-1}(2\theta)$ and diagonal weights as $\operatorname{Gamma}^{-1}(\alpha+\theta)$ for $\theta>0$ and $\alpha>-\theta$. We show that…

Probability · Mathematics 2024-05-09 Sayan Das , Weitao Zhu

We study energy relaxation in a phenomenological model for polymer built from rheological considerations: a one dimensional nonlinear lattice with dissipative couplings. These couplings are well known in polymer's community to be possibly…

Statistical Mechanics · Physics 2009-11-07 F. Gobet , S. Ciliberto , T. Dauxois

In this paper we study a two-dimensional directed self-avoiding walk model of a random copolymer in a random emulsion. The copolymer is a random concatenation of monomers of two types, $A$ and $B$, each occurring with density 1/2. The…

Probability · Mathematics 2009-11-13 Frank den Hollander , Nicolas Pétrélis

We use computer simulations to study the relaxation of strongly deformed highly entangled polymer melts in the non-linear viscoelastic regime, focusing on anisotropic chain conformations after isochoric elongation. The Doi-Edwards tube…

Soft Condensed Matter · Physics 2018-11-21 Hsiao-Ping Hsu , Kurt Kremer

Lattice-field calculations are performed on a Gaussian polymer chain confined to move within the region defined by two fused spheres. The results of the calculations are in accord with recent experimental measurements and computer…

Condensed Matter · Physics 2009-10-31 S. Tsonchev , R. D. Coalson

Conformations of a single semiflexible polymer chain dissolved in a low molecular weight liquid crystalline solvents (nematogens) are examined by using a mean field theory. We takes into account a stiffness and partial orientational…

Soft Condensed Matter · Physics 2009-11-07 Akihiko Matsuyama