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Related papers: Heteropolymers in a Solvent at an Interface

200 papers

We present results from extensive molecular dynamics simulations of collapse transitions of hydrophobic polymers in explicit water focused on understanding effects of lengthscale of the hydrophobic surface and of attractive interactions on…

Statistical Mechanics · Physics 2007-05-23 Manoj V. Athawale , Gaurav Goel , Tuhin Ghosh , Thomas M. Truskett , Shekhar Garde

In suitable environments, proteins, nucleic acids and certain synthetic polymers fold into unique conformations. This work shows that it is possible to construct lattice models of foldable heteropolymers by expressing the energy only in…

Soft Condensed Matter · Physics 2009-10-31 Michele Vendruscolo

In this paper, we discuss the phenomenon of a spontaneous polarisation of a neutral hard planar interface for valence asymmetric coulombic systems. Within a field theoretical description, we account for the existence of non trivial charge…

Soft Condensed Matter · Physics 2019-01-24 D. di Caprio , M. Holovko

Hydrophobic interactions provide driving forces for protein folding, membrane formation, and oil-water separation. Motivated by information theory, the poorly understood nonpolar solute interactions in water are investigated. A simple…

chem-ph · Physics 2008-02-03 G. Hummer , S. Garde , A. E. Garcia , A. Pohorille , L. R. Pratt

We address the problem of inverse polymer swelling. This phenomenon, in which a collapsed polymer chain swells upon decreasing temperature, can be observed experimentally in so-called thermoreversible homopolymers in aqueous solution, and…

Soft Condensed Matter · Physics 2007-05-23 Marco Pretti

Contours associated to many interesting low-temperature statistical mechanics models (2D Ising model, (2+1)D SOS interface model, etc) can be described as self-interacting and self-avoiding walks on $\mathbb Z^2$. When the model is defined…

Probability · Mathematics 2015-06-22 Dmitry Ioffe , Senya Shlosman , Fabio Lucio Toninelli

Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil-globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we…

Soft Condensed Matter · Physics 2023-06-28 Bernat Durà Faulí , Valentino Bianco , Giancarlo Franzese

Zero temperature limit in (1+1) directed polymers with finite range correlated random potential is studied. In terms of the standard replica technique it is demonstrated that in this limit the considered system reveals the one-step replica…

Statistical Mechanics · Physics 2017-02-01 Victor Dotsenko

We consider self-avoiding lattice polygons, in the hypercubic lattice, as a model of a ring polymer adsorbed at a surface and either being desorbed by the action of a force, or pushed towards the surface. We show that, when there is no…

Statistical Mechanics · Physics 2018-02-14 AJ Guttmann , EJ Janse van Rensburg , I Jensen , SG Whittington

Simple coarse-grained hydrophobic-polar models for heteropolymers as the lattice HP and the off-lattice AB model allow a general classification of characteristic behaviors for hydrophobic-core based tertiary folding. The strongly reduced…

Soft Condensed Matter · Physics 2007-10-25 Michael Bachmann , Wolfhard Janke

We give sufficient conditions for tightness in the space C([0,1]) for sequences of probability measures which enjoy a suitable decoupling between zero level set and excursions. Applications of our results are given in the context of…

Probability · Mathematics 2007-05-23 Francesco Caravenna , Giambattista Giacomin , Lorenzo Zambotti

Surface scattering of free electrons strongly modifies the electromagnetic response near the interface. Due to the inherent anisotropy of the surface scattering that necessarily reverses the normal the interface component of the electron…

Optics · Physics 2018-07-11 Evgenii E. Narimanov

We apply a phenomenological theory of polar liquids to calculate the interaction energy between two plane surfaces at nm-distances. We show that depending on the properties of the surface-liquid interfaces, the interacting surfaces induce…

Soft Condensed Matter · Physics 2013-04-24 P. O. Fedichev , L. I. Menshikov

The motion of driven interfaces in random media at finite temperature $T$ and small external force $F$ is usually described by a linear displacement $h_G(t) \sim V(F,T) t$ at large times, where the velocity vanishes according to the creep…

Disordered Systems and Neural Networks · Physics 2008-11-04 Cecile Monthus , Thomas Garel

Thermal scaling and relaxation of the interface width in an electrophoretic deposition of polymer chains is examined by a three-dimensional Monte Carlo simulation on a discrete lattice. Variation of the equilibrium interface width $W_r$…

Soft Condensed Matter · Physics 2007-05-23 Frank W. Bentrem , Ras B. Pandey

The solvation of charged, nanometer-sized spherical solutes in water, and the effective, solvent-induced force between two such solutes are investigated by constant temperature and pressure Molecular Dynamics simulations of model solutes…

Soft Condensed Matter · Physics 2009-11-10 J. Dzubiella , J. -P. Hansen

We consider a general model of a heterogeneous polymer chain fluctuating in the proximity of an interface between two selective solvents. The heterogeneous character of the model comes from the fact that the monomer units interact with the…

Probability · Mathematics 2009-09-29 Francesco Caravenna , Giambattista Giacomin , Lorenzo Zambotti

All metamaterial applications are based upon the idea that extreme material properties can be achieved through appropriate dynamic homogenization of composites. This homogenization is almost always done for infinite domains and the results…

Materials Science · Physics 2017-07-05 Ankit Srivastava , John R. Willis

We introduce a polymer model where the transition from swollen to compact configurations is due to interactions between the monomers and the solvent. These interactions are the origin of the effective attractive interactions between…

Statistical Mechanics · Physics 2007-05-23 Paolo De Los Rios , Guido Caldarelli

We consider a model for a polymer interacting with an attractive wall through a random sequence of charges. We focus on the so-called diluted limit, when the charges are very rare but have strong intensity. In this regime, we determine the…

Probability · Mathematics 2008-07-26 Erwin Bolthausen , Francesco Caravenna , Béatrice de Tilière