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The usual Kramers theory of reaction rates in a condensed medium predict the rate to have an $\eta^{-1}$ dependence, $\eta$ being the viscosity of the medium. However, experiments on ligand binding to proteins performed long ago, showed the…

Soft Condensed Matter · Physics 2019-06-18 K L Sebastian

We study protein diffusion in multicomponent lipid membranes close to a rigid substrate separated by a layer of viscous fluid. The large-distance, long-time asymptotics for Brownian motion are calculated using a nonlinear stochastic…

Soft Condensed Matter · Physics 2009-11-11 Yaroslav Tserkovnyak , David R. Nelson

The aim of this article is to discuss the estimation of the diffusivity coefficient of a homogeneous metal rod from temperature values at a fixed point in the bar for different time instants. The time-dependent problem of heat conduction is…

Numerical Analysis · Mathematics 2024-04-22 Guillermo Federico Umbricht , Diana Rubio

We analyze a one dimensional quantum model with off-diagonal disorder, consisting of a sequence of potential energy barriers whose width is a random variable either uniformly or normally distributed. We investigate how the disorder and the…

Statistical Mechanics · Physics 2015-06-12 Matteo Colangeli , Lamberto Rondoni

We study the motion of a Brownian particle in a medium with inhomogeneous temperature. In the overdamped regime of low Reynolds numbers, the probability distribution function (PDF) of the particle is obtained from the van Kampen diffusion…

Statistical Mechanics · Physics 2019-06-06 Oded Farago

We consider many-particle diffusion in one spatial dimension modeled as Random Walks in a Random Environment (RWRE). A shared short-range space-time random environment determines the jump distributions that drive the motion of the…

Statistical Mechanics · Physics 2024-06-26 Jacob Hass , Hindy Drillick , Ivan Corwin , Eric Corwin

The dynamical properties of a tracer or impurity particle immersed in a host gas of inelastic and rough hard spheres in the homogeneous cooling state is studied. Specifically, the breakdown of energy equipartition as characterized by the…

Soft Condensed Matter · Physics 2019-10-02 Francisco Vega Reyes , Antonio Lasanta , Andrés Santos , Vicente Garzó

The exact Lifshitz theory is utilized for the systematic calculation of the retarded room temperature Hamaker coefficients between 26 identical isotropic elemental metals embedded in vacuum or pure water. The full spectral method,…

Chemical Physics · Physics 2022-05-20 P. Tolias

In this paper we develop a random walk model on lattice for coordinate dependent diffusion at constant temperature in contact with a heat bath. We employ here a coordinate dependent waiting time of the random walker to make the diffusivity…

Statistical Mechanics · Physics 2020-08-27 Rohan Maniar , A. Bhattacharyay

In this work the diffusion in the quenched trap model with diverging mean waiting times is examined. The approach of randomly stopped time is extensively applied in order to obtain asymptotically exact representation of the disorder…

Statistical Mechanics · Physics 2020-07-21 Stanislav Burov

A computational model is proposed to investigate drug delivery systems in which erosion and diffusion mechanisms are participating in the drug release process. Our approach allowed us to analytically estimate the crossover point between…

The diffusion of elements is a key process in understanding the unusual surface composition of white dwarfs stars and their spectral evolution. The diffusion coefficients of Paquette et al. (1986) have been widely used to model diffusion in…

Solar and Stellar Astrophysics · Physics 2020-06-17 R. A. Heinonen , D. Saumon , J. Daligault , C. E. Starrett , S. D. Baalrud , G. Fontaine

We determine both barrier heights and prefactors for protein folding by applying constraints determined from experimental rate measurements to a Kramers theory for folding rate. The theoretical values are required to match the experimental…

Biomolecules · Quantitative Biology 2009-11-11 Steven S. Plotkin

Using Monte Carlo simulations we investigate some new aspects of the phase diagram and the behavior of the diffusion coefficient in an associating lattice gas (ALG) model on different regions of the phase diagram. The ALG model combines a…

Soft Condensed Matter · Physics 2015-05-13 Marcia M. Szortyka , Vera Henriques , Mauricio Girardi , Marcia C. Barbosa

Bimolecular diffusion coefficients are important parameters used by atmospheric models to calculate altitude profiles of minor constituents in an atmosphere. Unfortunately, laboratory measurements of these coefficients were never conducted…

Earth and Planetary Astrophysics · Physics 2015-10-28 Sylvain Plessis , Damon McDougall , Kathy Mandt , Thomas Greathouse , Adrienn Luspay-Kuti

We study the diffusivity of a small particle immersed in a square box filled with a non-ideal multicomponent fluid in the presence of thermal fluctuations. Our approach is based on the numerical integration of fluctuating lattice Boltzmann…

Fluid Dynamics · Physics 2021-12-14 Xiao Xue , Luca Biferale , Mauro Sbragaglia , Federico Toschi

This work discusses numerical studies of the barrier properties of k-mer packings by Monte Carlo method. The studied variants of regular and non-regular arrangements on a square lattice included models of random sequential adsorption (RSA)…

Statistical Mechanics · Physics 2015-06-15 N. Lebovka , S. Khrapatiy , Vygornitskyi , N. Pivovarova

We investigate single-particle diffusion in a two-state Langevin model where the friction coefficient randomly switches between low-friction (liquid-like) and high-friction (glassy-like) states. The dynamics are governed by the ratio…

Chemical Physics · Physics 2025-12-03 Fivos Perakis , Takeshi Kawasaki , Shinji Saito

Energetic particle redistribution in the presence of multiple Alfv\'en eigenmodes is analyzed in [PPCF 58, 014019 (2016)] for the ITER 15MA baseline scenario: non-linear hybrid simulations (within their well known limits) point out that…

Plasma Physics · Physics 2022-11-17 Nakia Carlevaro , Giovanni Montani , Matteo Valerio Falessi , Philipp Lauber

Demixing of binary fluids subjected to slow temperature ramps shows repeated waves of nucleation which arise as a consequence of the competition between generation of supersaturation by the temperature ramp and relaxation of supersaturation…

Statistical Mechanics · Physics 2012-10-16 Izabella J. Benczik , Jürgen Vollmer
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