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A colloidal system of spheres interacting with both a deep and narrow attractive potential and a shallow long-ranged barrier exhibits a prepeak in the static structure factor. This peak can be related to an additional mesoscopic length…

Soft Condensed Matter · Physics 2009-11-13 O. Henrich , A. M. Puertas , M. Sperl , J. Baschnagel , M. Fuchs

In this paper, we study the formation of clusters for stochastic interacting particle systems (SIPS) that interact through short-range attractive potentials in a periodic domain. We consider kinetic (underdamped) Langevin dynamics and focus…

Numerical Analysis · Mathematics 2025-10-30 Benedict Leimkuhler , René Lohmann , Grigorios A. Pavliotis , Peter A. Whalley

Bacteria can spontaneously develop collective motions by aligning their motions in dense systems. Here, we show that bacteria can also respond collectively to an alternating electrical field and form dynamic clusters oscillating at the same…

Soft Condensed Matter · Physics 2022-10-11 Mei Mei Bao , Isaiah Eze Igwe , Kang Chen , Tian Hui Zhang

We study clustering in a stochastic system of particles sliding down a fluctuating surface in one and two dimensions. In steady state, the density-density correlation function is a scaling function of separation and system size.This scaling…

Statistical Mechanics · Physics 2009-11-13 Mustansir Barma

Understanding cellular response to mechanical forces is immensely important for a plethora of biological processes. Focal adhesions are multi-molecular protein assemblies that connect the cell to the extracellular matrix and play a pivotal…

Biological Physics · Physics 2019-10-25 Rumi De

I discuss the so-called stochastic individual based model of adaptive dynamics and in particular how different scaling limits can be obtained by taking limits of large populations, small mutation rate, and small effect of single mutations…

Populations and Evolution · Quantitative Biology 2021-07-06 Anton Bovier

We classify and predict the asymptotic dynamics of a class of swarming models. The model consists of a conservation equation in one dimension describing the movement of a population density field. The velocity is found by convolving the…

Populations and Evolution · Quantitative Biology 2015-05-13 A. J. Leverentz , C. M. Topaz , A. J. Bernoff

Evolutionary dynamics in finite populations is known to fixate eventually in the absence of mutation. We here show that a similar phenomenon can be found in stochastic game dynamical batch learning, and investigate fixation in learning…

Physics and Society · Physics 2015-05-27 John Realpe-Gomez , Bartosz Szczesny , Luca Dall'Asta , Tobias Galla

We study gelation in suspensions of model colloidal particles with short-ranged attractive and long-ranged repulsive interactions by means of three-dimensional fluorescence confocal microscopy. At low packing fractions, particles form…

Soft Condensed Matter · Physics 2009-11-10 Andrew I. Campbell , Valerie J. Anderson , Jeroen S. van Duijneveldt , Paul Bartlett

We study aggregation-fragmentation processes in which pairs of clusters can aggregate, and each cluster can break into two fragments. If the rates of aggregation and fragmentation do not depend on the masses, detailed balance does not hold,…

Statistical Mechanics · Physics 2026-05-22 P. L. Krapivsky

In this work, we analyse the stick-slip motion of a soft elastomeric block on a smooth, hard surface under the application of shear, which is induced by a puller moving at a steady velocity. The frictional stress is generated by make-break…

Soft Condensed Matter · Physics 2024-05-24 Vinay A. Juvekar , Arun K. Singh

Clusters appear in nature in a diversity of contexts, involving distances as long as the cosmological ones, and down to atoms and molecules and the very small nuclear size. They also appear in several other scenarios, in particular in…

Populations and Evolution · Quantitative Biology 2020-02-19 D. Bazeia , M. V. de Moraes , B. F. de Oliveira

The paper deals with the two-state (opening-closing of base pairs) model used to describe the fluctuation dynamics of a single bubble formation. We present an exact solution for the discrete and finite size version of the model that…

Soft Condensed Matter · Physics 2009-11-10 D. J. Bicout , E. Kats

We analyze the cluster formation in a non-ergodic stochastic system as a result of counter-flow, with the aid of an exactly solvable model. To illustrate the clustering, a two species asymmetric simple exclusion process with impurities on a…

Statistical Mechanics · Physics 2023-05-23 Amit Kumar Chatterjee , Hisao Hayakawa

Clustering is a fundamental collective phenomenon in agent-based models (ABMs) of opinion dynamics. To study clustering in systems with co-evolving social and opinion variables, we derive stochastic partial differential equation (SPDE)…

Physics and Society · Physics 2026-05-01 Sebastian Zimper , Nataša Djurdjevac Conrad , Federico Cornalba , Ana Djurdjevac

Systems of self-propelled particles are known for their tendency to aggregate and to display swarm behavior. We investigate two model systems, self-propelled rods interacting via volume exclusion, and sinusoidally-beating flagella embedded…

Biological Physics · Physics 2010-09-28 Yingzi Yang , Vincent Marceau , Gerhard Gompper

Key features of the mechanical response of amorphous particulate materials, such as foams, emulsions, and granular media, to applied stress are determined by the frequency and size of particle rearrangements that occur as the system…

Soft Condensed Matter · Physics 2017-06-23 K. Zhang , C. -C. Kuo , C. S. O'Hern , M. Dennin

Galaxy clusters provide a unique environment to study galaxy evolution. The role of cluster dynamical states in shaping the physical and morphological properties of member galaxies remains an open question. We aim to assess the impact of…

Astrophysics of Galaxies · Physics 2025-10-29 S. Véliz Astudillo , E. R. Carrasco , J. L. Nilo Castellón , A. Zenteno , H. Cuevas

A class of stochastic individual-based models, written in terms of coupled velocity jump processes, is presented and analysed. This modelling approach incorporates recent experimental findings on behaviour of locusts. It exhibits nontrivial…

Analysis of PDEs · Mathematics 2011-04-14 Radek Erban , Jan Haskovec

In large clonal populations, several clones generally compete which results in complex evolutionary and ecological dynamics: experiments show successive selective sweeps of favorable mutations as well as long-term coexistence of multiple…

Populations and Evolution · Quantitative Biology 2019-03-29 Sylvain Billiard , Charline Smadi
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