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We investigate the propagation of a suddenly applied tension along a thermally excited semi-flexible polymer using analytical approximations, scaling arguments and numerical simulation. This problem is inherently non-linear. We find…

Soft Condensed Matter · Physics 2009-10-28 Udo Seifert , Wolfgang Wintz , Philip Nelson

We compute the entropic interactions between two colloidal spheres immersed in a dilute suspension of semi-flexible rods. Our model treats the semi-flexible rod as a bent rod at fixed angle, set by the rod contour and persistence lengths.…

Soft Condensed Matter · Physics 2016-08-31 A. W. C. Lau , Keng-Hui Lin , A. G. Yodh

Spurred by an experimental controversy in the literature, we investigate the end-monomer dynamics of semiflexible polymers through Brownian hydrodynamic simulations and dynamic mean-field theory. Precise experimental observations over the…

Soft Condensed Matter · Physics 2009-06-20 Michael Hinczewski , Xaver Schlagberger , Michael Rubinstein , Oleg Krichevsky , Roland R. Netz

Hypothesis: The collective dynamics and self-assembly of colloids floating at a fluid/fluid interface is a balance between deterministic lateral interaction forces, viscous resistance to colloid motion along the surface and thermal…

Soft Condensed Matter · Physics 2022-10-05 Archit Dani , Mohsen Yeganeh , Charles Maldarelli

Due to its inherent intertwinement with irreversibility, entropy production is a prime observable to monitor in systems of active particles. In this numerical study, entropy production in the liquid, hexatic and solid phases of a…

Soft Condensed Matter · Physics 2024-12-11 Massimiliano Semeraro , Giuseppe Negro , Antonio Suma , Federico Corberi , Giuseppe Gonnella

By using the blob theory and computer simulations, we investigate the properties of a linear polymer performing a stationary rotational motion around a long impenetrable rod. In particular, in the simulations the rotation is induced by a…

We study fluctuations of entropy production for a charged Brownian particle confined in a harmonic trap and driven out of equilibrium by crossed electric and magnetic fields. The magnetic field is constant and perpendicular to the plane of…

Statistical Mechanics · Physics 2025-12-19 L. C. González-Morales , I. Pérez Castillo , J. I. Jiménez-Aquino

Using a simple model, we study the fluctuating dynamics of inextensible, semiflexible polar filaments interacting with active and directed force generating centres such as molecular motors. Taking into account the fact that the activity…

Soft Condensed Matter · Physics 2009-11-07 Tanniemola B. Liverpool

Polymer chains decorated with a fraction of monomers capable of forming reversible bonds form transient polymer networks that are important in soft and biological systems. If chains are flexible and the attractive monomers are all of the…

Soft Condensed Matter · Physics 2023-10-18 Lorenzo Rovigatti , Francesco Sciortino

Active gels perform key mechanical roles inside the cell, such as cell division, motion and force sensing. The unique mechanical properties required to perform such functions arise from the interactions between molecular motors and…

Soft Condensed Matter · Physics 2022-08-16 Andrés Córdoba

A rigid object moving in a viscous fluid and in close proximity with an elastic wall experiences self-generated elastohydrodynamic interactions. This has been the subject of an intense research activity, with a recent and growing attention…

Soft Condensed Matter · Physics 2023-07-04 Aditya Jha , Yacine Amarouchene , Thomas Salez

A general kind of Brownian vortexes are demonstrated by applying an external nonconservative force field to a colloidal particle bound by a conservative optical trapping force at a liquid-air interface. As the liquid medium is translated at…

Soft Condensed Matter · Physics 2011-05-09 Manas Khan , A. K. Sood

We follow the dynamics of an ensemble of interacting self-propelled semi-flexible polymers in contact with a thermal bath. We characterize structure and dynamics of the passive system and as a function of the motor activity. We find that…

Soft Condensed Matter · Physics 2014-04-14 Davide Loi , Stefano Mossa , Leticia F. Cugliandolo

We suggest a theoretical description of the force-induced translocation dynamics of a polymer chain through a nanopore. Our consideration is based on the tensile (Pincus) blob picture of a pulled chain and the notion of propagating front of…

Soft Condensed Matter · Physics 2012-04-17 J. L. A. Dubbeldam , V. G. Rostiashvili , A. Milchev , T. A. Vilgis

We consider a general discrete model for heterogeneous semiflexible polymer chains. Both the thermal noise and the inhomogeneous character of the chain (the disorder) are modeled in terms of random rotations. We focus on the quenched…

Probability · Mathematics 2008-12-20 Francesco Caravenna , Giambattista Giacomin , Massimiliano Gubinelli

Active semiflexible filaments are crucial in various biophysical processes, yet insights into their single-filament behavior have predominantly relied on theory and simulations, owing to the scarcity of controllable synthetic systems. Here,…

Soft Condensed Matter · Physics 2025-07-14 Bipul Biswas , Prasanna More , Hima Nagamanasa Kandula

It has been recently shown that randomly charged surfaces can exhibit long range electrostatic interactions even when they are net neutral. These forces depend on the specific realization of charge disorder and thus exhibit sample to sample…

Soft Condensed Matter · Physics 2011-12-30 David S. Dean , Ali Naji , Rudolf Podgornik

We investigate the stretching response of a thick polymer model by means of extensive stochastic simulations. The computational results are synthesized in an analytic expression that characterizes how the force versus elongation curve…

Soft Condensed Matter · Physics 2009-11-11 Ngo Minh Toan , Davide Marenduzzo , Cristian Micheletti

We discuss the plastic behavior of an amorphous matrix reinforced by hard particles. A mesoscopic depinning-like model accounting for Eshelby elastic interactions is implemented. Only the effect of a plastic disorder is considered.…

Materials Science · Physics 2016-02-17 Botond Tyukodi , Claire A. Lemarchand , Jesper S. Hansen , Damien Vandembroucq

We study the viscoelastic properties of highly entangled, flexible, self-propelled polymers using Brownian dynamics simulations. Our results show that the active motion of the polymer increases the height of the stress plateau by orders of…

Soft Condensed Matter · Physics 2023-10-05 Davide Breoni , Christina Kurzthaler , Benno Liebchen , Hartmut Löwen , Suvendu Mandal