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In a variety of biological situations, swimming cells have to move through complex fluids. Similarly, mucociliary clearance involves the transport of polymeric fluids by beating cilia. Here, we consider the extent to which complex fluids…

Soft Condensed Matter · Physics 2009-09-15 Thibaud Normand , Eric Lauga

The Euler buckling of rods is a long-studied mechanical instability, and it remains relevant to this day, as the constituent components in many biological and physical systems are linear polymers, such as microtubules or carbon nanotubes.…

Statistical Mechanics · Physics 2026-05-22 Richard Huang , David R. Nelson , Suraj Shankar

We revisit the model of a Brownian particle in a heat bath submitted to an actively controlled force proportional to the velocity that leads to thermal noise reduction (cold damping). We investigate the influence of the continuous feedback…

Statistical Mechanics · Physics 2015-06-04 T. Munakata , M. L. Rosinberg

Generation of mechanical force regulated by external electric field is studied both theoretically and by molecular dynamics (MD) simulations. The force arises in deformable bodies linked to the free end of a grafted polyelectrolyte chain…

Statistical Mechanics · Physics 2014-11-11 Christian Seidel , Yury A. Budkov , Nikolay V. Brilliantov

We report molecular dynamics simulations of the segregation of two overlapping chains in cylindrical confinement. We find that the entropic repulsion between the chains can be sufficiently strong to cause segregation on a time scale that is…

Soft Condensed Matter · Physics 2011-11-09 Axel Arnold , Suckjoon Jun

Motivated by the observation of the storage of excess elastic free energy - (prestress) -- in cross linked semiflexible networks, we consider the problem of the conformational statistics of a single semiflexible polymer in a quenched random…

Soft Condensed Matter · Physics 2019-04-10 Valentin M. Slepukhin , Maximilian J. Grill , Kei W. Müller , Wolfgang A. Wall , Alex J. Levine

The flow behavior of a semiflexible polymer in microchannels is studied using Multiparticle Collision Dynamics (MPC), a particle-based hydrodynamic simulation technique. Conformations, distributions, and radial cross-streamline migration…

Soft Condensed Matter · Physics 2015-05-19 Raghunath Chelakkot , Roland G. Winkler , Gerhard Gompper

The transport of deformable particles through porous media underlies a wealth of applications ranging from filtration to oil recovery to the transport and spreading of biological agents. Using direct numerical simulations, we analyze the…

Soft Condensed Matter · Physics 2020-06-09 Brato Chakrabarti , Charles Gaillard , David Saintillan

We theoretically study the Casimir-Polder force on an atom in a arbitrary initial state in a rather general electromagnetic environment wherein the materials may have a nonreciprocal bianisotropic dispersive response. It is shown that under…

Quantum Physics · Physics 2018-02-28 Mário G. Silveirinha , S. Ali Hassani Gangaraj , George W. Hanson , Mauro Antezza

We introduce a class of models of semiflexible polymers. The latter are characterized by a strong rigidity, the correlation length associated to the gradient-gradient correlations, called the persistence length, being of the same order as…

Probability · Mathematics 2011-08-25 Ostap Hryniv , Yvan Velenik

In this paper, we study the equilibrium properties of polymer chains end-tethered to a fluid membrane. The loss of conformational entropy of the polymer results in an inhomogeneous pressure field that we calculate for gaussian chains. We…

Soft Condensed Matter · Physics 2009-10-31 T. Bickel , C. Jeppesen , C. M. Marques

Epithelial cell layers on soft elastic substrates or pillar arrays are commonly used as model systems for investigating the role of force in tissue growth, maintenance and repair. Here we show analytically that the experimentally observed…

Tissues and Organs · Quantitative Biology 2012-01-16 Carina M. Edwards , Ulrich S. Schwarz

The structure of flexible polymers endgrafted in cylindrical pores of diameter D is studied as a function of chain length N and grafting density \sigma, assuming good solvent conditions. A phenomenological scaling theory, describing the…

Soft Condensed Matter · Physics 2009-11-11 D. I. Dimitrov , A. Milchev , K. Binder

The concept of swim pressure quantifies the average force exerted by microswimmers on confining walls in non-equilibrium. Here we explore how the swim pressure depends on the wall curvature and on the presence of sharp corners in the wall.…

Soft Condensed Matter · Physics 2015-10-02 Frank Smallenburg , Hartmut Löwen

Brownian and fractional processes are useful computational tools for the modelling of physical phenomena. Here, modelling linear homopolymers in solution as Brownian or fractional processes, we develop a formalism to take into account both…

Soft Condensed Matter · Physics 2025-01-23 Samuel Eleutério , R. Vilela Mendes

Recently, it has been shown that entropy can be used to sort Brownian particles according to their size. In particular, a combination of a static and a time-dependent force applied on differently sized particles which are confined in an…

Chemical Physics · Physics 2014-08-26 Thomas Motz , Gerhard Schmid , Peter Hänggi , David Reguera , J. Miguel Rubí

A quantitative theory of the buckling of a worm like chain based on a semi-classical approximation of the partition function is presented. The contribution of thermal fluctuations to the force-extension relation that allows to go beyond the…

Soft Condensed Matter · Physics 2016-08-14 Marc Emanuel , Hervé Mohrbach , Mehmet Sayar , Helmut Schiessel , Igor M. Kulić

Under high cylindrical confinement, segments of ring polymers can be localized along the long axis of the cylinder by introducing internal loops within the ring polymer. The emergent organization of the polymer segments occurs because of…

Soft Condensed Matter · Physics 2026-04-06 Sanjay Bhandarkar , Debarshi Mitra , Jürgen Horbach , Apratim Chatterji

We analyze the non-equilibrium shape fluctuations of giant unilamellar vesicles encapsulating motile bacteria. Owing to bacteria--membrane collisions, we experimentally observe a significant increase in the magnitude of membrane…

Soft Condensed Matter · Physics 2020-04-22 Sho C. Takatori , Amaresh Sahu

We compare Monte Carlo simulations of knotted and unknotted polymers whose ends are connected to two parallel walls. The force $f$ exerted on the polymer is measured as a function of the separation $R$ between the walls. For unknotted…

Statistical Mechanics · Physics 2009-11-07 Oded Farago , Yacov Kantor , Mehran Kardar