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Force induced stretching of polymers is important in a variety of contexts. We have used theory and simulations to describe the response of homopolymers, with $N$ monomers, to force ($f$) in good and poor solvents. In good solvents and for…

Soft Condensed Matter · Physics 2009-11-13 Greg Morrison , Changbong Hyeon , N. M. Toan , Bae-Yeun Ha , D. Thirumalai

Nano-scale confinement of polymer in cone-shaped geometries occurs in many experimental situations. A flexible polymer confined in a cone-shaped nano-channel is studied theoretically and using molecular dynamics simulations. Distribution of…

Soft Condensed Matter · Physics 2016-02-24 Narges Nikoofard , Hossein Fazli

In order to probe with high precision the tails of the ground-state energy distribution of disordered spin systems, K\"orner, Katzgraber and Hartmann \cite{Ko_Ka_Ha} have recently proposed an importance-sampling Monte-Carlo Markov chain in…

Disordered Systems and Neural Networks · Physics 2007-05-23 Cecile Monthus , Thomas Garel

Monte Carlo simulations are used to study the translocation of a polymer into a cavity. Modeling the polymer as a hard-sphere chain with a length up to N=601 monomers, we use a multiple-histogram method to measure the variation of the…

Soft Condensed Matter · Physics 2021-03-25 James M. Polson , David R. Heckbert

The shape of a polymer plays an important role in determining its interactions with other molecules and with the environment, and is in turn affected by both of them. As a consequence, in the literature the shape properties of a chain in…

Soft Condensed Matter · Physics 2017-07-26 Alberto S. Sassi , Salvatore Assenza , Paolo De Los Rios

We report an experimental study of 2D dipole clusters formed by small magnetic particles floating at the air-water interface. The particles form hexagonally ordered clusters due to interplay between dipole-dipole repulsion and confining…

Soft Condensed Matter · Physics 2007-05-23 M. Golosovsky , Y. Saado , D. Davidov

We consider a directed random walk model of a random heterogeneous polymer in the proximity of an interface separating two selective solvents. This model exhibits a localization/delocalization transition. A positive value of the free energy…

Probability · Mathematics 2007-05-23 Giambattista Giacomin , Fabio Lucio Toninelli

The probability distribution for the free energy of directed polymers in random media (DPRM) with uncorrelated noise in $d=1+1$ dimensions satisfies the Tracy-Widom distribution. We inquire if and how this universal distribution is modified…

Statistical Mechanics · Physics 2016-07-06 Sherry Chu , Mehran Kardar

We consider the optimal paths in a $d$-dimensional lattice, where the bonds have isotropically correlated random weights. These paths can be interpreted as the ground state configuration of a simplified polymer model in a random potential.…

Disordered Systems and Neural Networks · Physics 2009-11-07 Roland Schorr , Heiko Rieger

Monte Carlo computer simulations are used to study the segregation behaviour of two polymers under cylindrical confinement. Using a multiple-histogram method, the conformational free energy, F, of the polymers was measured as a function of…

Soft Condensed Matter · Physics 2018-05-24 James M. Polson , Deanna R. -M. Kerry

We study a model of a semiflexible long chain polymer confined to a two-dimensional slit of width $w$, and interacting with the walls of the slit. The interactions with the walls are controlled by Boltzmann weights $a$ and $b$, and the…

Statistical Mechanics · Physics 2019-12-03 Nicholas R. Beaton , Leo Li , Jonathon Liu , Thomas Wong

We uncover a nontrivial signature of the hierarchical structure of quasi-degenerate random directed polymers (RDPs) at zero temperature in 1+1 dimensional lattices. Using a cylindrical geometry with circumference $8 \leq W \leq 512$, we…

Statistical Mechanics · Physics 2009-10-31 Per Jögi , Didier Sornette

By extending the Kac-Rice approach to manifolds of finite internal dimension, we show that the mean number $\left\langle\mathcal{N}_\mathrm{tot}\right\rangle$ of all possible equilibria (i.e. force-free configurations, a.k.a. equilibrium…

Disordered Systems and Neural Networks · Physics 2018-08-28 Yan V Fyodorov , Pierre Le Doussal , Alberto Rosso , Christophe Texier

We study the dynamics of a polymer or a D-dimensional elastic manifold diffusing and convected in a non-potential static random flow (the ``randomly driven polymer model''). We find that short-range (SR) disorder is relevant for d < 4 for…

Condensed Matter · Physics 2009-07-10 Kay Joerg Wiese , Pierre Le Doussal

Previous work shows that a net directed motion arises from a system of individual particles undergoing run-and-tumble dynamics in the presence of an array of asymmetric barriers. Here, we show that when the individual particle is replaced…

Soft Condensed Matter · Physics 2013-03-01 Mew-Bing Wan , YongSeok Jho

Entropy-driven directed translocation of a flexible polymer through a cone-shaped channel is studied theoretically and using computer simulation. For a given length of the channel, the effective force of entropic origin acting on the…

Soft Condensed Matter · Physics 2015-06-12 Narges Nikoofard , Hamidreza Khalilian , Hossein Fazli

Consider directed polymers in a random environment on the complete graph of size $N$. This model can be formulated as a product of i.i.d. $N\times N$ random matrices and its large time asymptotics is captured by Lyapunov exponents and the…

Probability · Mathematics 2018-01-22 Francis Comets , Gregorio R. Moreno Flores , Alejandro F. Ramirez

The author gave the sharp asymptotic behavior of the free energy of $1+1$ dimensional directed polymers in random environment(DPRE) as the inverse temperature $\beta\to 0$ under the assumption that random environment satisfies a certain…

Probability · Mathematics 2025-03-27 Makoto Nakashima

We consider a directed polymer model in dimension $1+1$, where the disorder is given by the occupation field of a Poisson system of independent random walks on $\mathbb Z$. In a suitable continuum and weak disorder limit, we show that the…

Probability · Mathematics 2021-04-20 Hao Shen , Jian Song , Rongfeng Sun , Lihu Xu

The impact of impenetrable obstacles on the energetics and equilibrium structure of strongly repulsive directed polymers is investigated. As a result of the strong interactions, regions of severe polymer depletion and excess are found in…

Soft Condensed Matter · Physics 2013-08-30 Anton Souslov , D. Zeb Rocklin , Paul M. Goldbart