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Due to the complex characteristics of bottle-brush polymers, it became a challenge to develop an efficient algorithm for studying such macromolecules under various solvent conditions or some constraints in the space by using computer…

Soft Condensed Matter · Physics 2011-07-08 Hsiao-Ping Hsu

With the developed "extended Monte Calro" (EMC) algorithm, we have studied the depinning transition in Ising-type lattice models by extensive numerical simulations, taking the random-field Ising model with a driving field and the driven…

Statistical Mechanics · Physics 2016-10-20 Lisha Sia , Xiaoyun Liao , Nengji Zhou

The scaling behaviour of randomly branched polymers in a good solvent is studied in two to nine dimensions, using as microscopic models lattice animals and lattice trees on simple hypercubic lattices. As a stochastic sampling method we use…

Statistical Mechanics · Physics 2009-11-10 Hsiao-Ping Hsu , Walter Nadler , Peter Grassberger

We introduce a simple lattice model in which percolation is constructed on top of critical percolation clusters, and show that it can be repeated recursively any number $n$ of generations. In two dimensions, we determine the percolation…

Statistical Mechanics · Physics 2015-08-05 Youjin Deng , Jesper Lykke Jacobsen , Xuan-Wen Liu

A grand canonical Monte Carlo (MC) algorithm is presented for studying the lattice gas model (LGM) of multiple protein sequence alignment, which coherently combines long-range interactions and variable-length insertions. MC simulations are…

Biomolecules · Quantitative Biology 2017-07-13 Akira R. Kinjo

We consider a percolation process in which $k$ points separated by a distance proportional to system size $L$ simultaneously connect together ($k>1$), or a single point at the center of a system connects to the boundary ($k=1$), through…

Disordered Systems and Neural Networks · Physics 2020-07-08 S. S. Manna , Robert M. Ziff

We study the geometry of the critical clusters in fully coordinated percolation on the square lattice. By Monte Carlo simulations (static exponents) and normal mode analysis (dynamic exponents), we find that this problem is in the same…

Statistical Mechanics · Physics 2009-10-31 Eduardo Cuansing , Jae Hwa Kim , Hisao Nakanishi

In the thesis we take the split chain approach to analyzing Markov chains and use it to establish fixed-width results for estimators obtained via Markov chain Monte Carlo procedures (MCMC). Theoretical results include necessary and…

Methodology · Statistics 2009-07-28 Krzysztof Latuszynski

We apply Monte Carlo Renormalization group to the crumpling transition in random surface models of fixed connectivity. This transition is notoriously difficult to treat numerically. We employ here a Fourier accelerated Langevin algorithm in…

High Energy Physics - Lattice · Physics 2009-10-28 D. Espriu , A. Travesset

We extend to quenched disordered systems the variational scheme for real space renormalization group calculations that we recently introduced for homogeneous spin Hamiltonians. When disorder is present our approach gives access to the flow…

Statistical Mechanics · Physics 2020-11-11 Yantao Wu , Roberto Car

We investigate the principal chiral model between two and four dimensions by means of a non perturbative Wilson-like renormalization group equation. We are thus able to follow the evolution of the effective coupling constants within this…

Statistical Mechanics · Physics 2009-10-31 M. Tissier , D. Mouhanna , B. Delamotte

A kinetic Monte Carlo method was used to simulate the diffusion of reptating polymer chains across the interface. A time-resolved fluorescence technique conjunction with direct energy transfer method was used to measure the extend of…

Soft Condensed Matter · Physics 2007-05-23 Erkan Tuzel , K. Batuhan Kisacikoglu , Onder Pekcan

Monte Carlo Renormalization Group (MCRG) methods were designed to study the non-perturbative phase structure and critical behavior of statistical systems and quantum field theories. I adopt the 2-lattice matching method used extensively in…

High Energy Physics - Lattice · Physics 2010-03-25 Anna Hasenfratz

We introduce a method based on the finite size scaling assumption which allows to determine numerically the critical point and critical exponents related to observables in an infinite system starting from the knowledge of the observables in…

Nuclear Theory · Physics 2008-11-26 B. Elattari , J. Richert , P. Wagner

In cluster tomography, we propose measuring the number of clusters $N$ intersected by a line segment of length $\ell$ across a finite sample. As expected, the leading order of $N(\ell)$ scales as $a\ell$, where $a$ depends on microscopic…

Disordered Systems and Neural Networks · Physics 2024-02-13 Helen S. Ansell , Samuel J. Frank , István A. Kovács

Techniques for approximately contracting tensor networks are limited in how efficiently they can make use of parallel computing resources. In this work we demonstrate and characterize a Monte Carlo approach to the tensor network…

Strongly Correlated Electrons · Physics 2017-10-12 William Huggins , C. Daniel Freeman , Miles Stoudenmire , Norm M. Tubman , K. Birgitta Whaley

We study non-uniform percolation in a two-dimensional cluster growth model with multiple seeds. With increasing concentration of seeds, the percolation threshold is found to increase monotonically, while the exponents for correlation…

Disordered Systems and Neural Networks · Physics 2014-10-08 Hongting Yang , Stephan Haas

We use the single-cluster Monte Carlo update algorithm to simulate the Ising model on two-dimensional Poissonian random lattices with up to 80,000 sites which are linked together according to the Voronoi/Delaunay prescription. In one set of…

High Energy Physics - Lattice · Physics 2009-09-25 W. Janke , M. Katoot , R. Villanova

The major difference between percolation and other phase transition models is the absence of an Hamiltonian and of a partition function. For this reason it is not straightforward to identify the corresponding field theory to be used as…

Statistical Mechanics · Physics 2025-02-04 Maria Chiara Angelini , Saverio Palazzi , Tommaso Rizzo , Marco Tarzia

We present a unifying, consistent, finite-size-scaling picture for percolation theory bringing it into the framework of a general, renormalization-group-based, scaling scheme for systems above their upper critical dimensions $d_c$.…

Statistical Mechanics · Physics 2017-05-16 Ralph Kenna , Bertrand Berche