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We present an efficient and exact Monte Carlo algorithm to simulate reversible aggregation of particles with dedicated binding sites. This method introduces a novel data structure of dynamic bond tree to record clusters and sequences of…

Quantitative Methods · Quantitative Biology 2011-09-27 Qiang Chang , Jin Yang

We study structural phase transition of polymer-grafted colloidal particles by Monte Carlo simulations on hard spherical particles. The interaction potential, which has a weak repulsive step outside the hard core, was validated with use of…

Soft Condensed Matter · Physics 2007-05-23 Yuki Norizoe , Toshihiro Kawakatsu

Although well described by mean-field theory in the thermodynamic limit, scaling has long been puzzling for finite systems in high dimensions. This raised questions about the efficacy of the renormalization group and foundational concepts…

Statistical Mechanics · Physics 2023-08-16 T. Ellis , R. Kenna , B. Berche

In the finite-size scaling analysis of Monte Carlo data, instead of computing the observables at fixed Hamiltonian parameters, one may choose to keep a renormalization-group invariant quantity, also called phenomenological coupling, fixed…

Statistical Mechanics · Physics 2011-08-31 Francesco Parisen Toldin

The critical phase of bond percolation on the random growing tree is examined. It is shown that the root cluster grows with the system size $N$ as $N^\psi$ and the mean number of clusters with size $s$ per node follows a power function $n_s…

Disordered Systems and Neural Networks · Physics 2011-04-21 Takehisa Hasegawa , Koji Nemoto

Percolation models with multiple percolating clusters have attracted much attention in recent years. Here we use Monte Carlo simulations to study bond percolation on $L_{1}\times L_{2}$ planar random lattices, duals of random lattices, and…

Statistical Mechanics · Physics 2016-08-31 Hsiao-Ping Hsu , Simon C. Lin , Chin-Kun Hu

We propose a novel finite size scaling analysis for percolation transition observed in complex networks. While it is known that cooperative systems in growing networks often undergo an infinite order transition with inverted…

Disordered Systems and Neural Networks · Physics 2013-11-08 Takehisa Hasegawa , Tomoaki Nogawa , Koji Nemoto

Using the concept of finite-size scaling, Monte Carlo calculations of various models have become a very useful tool for the study of critical phenomena, with the system linear dimension as a variable. As an example, several recent studies…

Statistical Mechanics · Physics 2009-10-31 Kurt Binder , Erik Luijten , Marcus Müller , Nigel B. Wilding , Henk W. J. Blöte

We describe in detail a new and highly efficient algorithm for studying site or bond percolation on any lattice. The algorithm can measure an observable quantity in a percolation system for all values of the site or bond occupation…

Statistical Mechanics · Physics 2009-11-07 M. E. J. Newman , R. M. Ziff

We study the problem of adsorption of self-interacting linear polymers situated in fractal containers that belong to the three-dimensional (3d) Sierpinski gasket (SG) family of fractals. Each member of the 3d SG fractal family has a fractal…

Statistical Mechanics · Physics 2009-11-07 S. Elezovic-Hadzic , I. Zivic , S. Milosevic

We consider bond percolation on the square lattice with perfectly correlated random probabilities. According to scaling considerations, mapping to a random walk problem and the results of Monte Carlo simulations the critical behavior of the…

Statistical Mechanics · Physics 2009-11-07 Róbert Juhász , Ferenc Iglói

Renormalization group calculations are used to give exact solutions for rigidity percolation on hierarchical lattices. Algebraic scaling transformations for a simple example in two dimensions produce a transition of second order, with an…

Statistical Mechanics · Physics 2011-07-26 R. B. Stinchcombe , M. F Thorpe

We study bond percolation of $N$ non-interacting Gaussian polymers of $\ell$ segments on a 2D square lattice of size $L$ with reflecting boundaries. Through simulations, we find the fraction of configurations displaying {\em no} connected…

Statistical Mechanics · Physics 2007-05-23 Manoj Gopalakrishnan , Beate Schmittmann , R. K. P. Zia

In this work, we employ a field-theoretic renormalization group approach to study a paradigmatic model of directed percolation. We focus on the perturbative calculation of the equation of state, extending the analysis to the three-loop…

Statistical Mechanics · Physics 2026-02-13 Michal Hnatič , Matej Kecer , Tomáš Lučivjanský , Lukáš Mižišin

The crystallisation of entangled polymers from their melt is investigated using computer simulation with a coarse-grained model. Using hybrid Monte Carlo simulations enables us to probe the behaviour of long polymer chains. We identify…

Soft Condensed Matter · Physics 2020-06-12 Xiaoliang Tang , Fucheng Tian , Tingyu Xu , Liangbin Li , Aleks Reinhardt

We describe a new method to compute renormalized coupling constants in a Monte Carlo renormalization group calculation. The method can be used for a general class of models, e.g., lattice spin or gauge models. The basic idea is to simulate…

High Energy Physics - Lattice · Physics 2009-10-22 M. Hasenbusch , K. Pinn , C. Wieczerkowski

We develop a renormalization group method to investigate synchronization clusters in a one-dimensional chain of nearest-neighbor coupled phase oscillators. The method is best suited for chains with strong disorder in the intrinsic…

Pattern Formation and Solitons · Physics 2016-11-28 Oleg Kogan , Jeffrey L. Rogers , M. C. Cross , G. Refael

Monte Carlo integration is a commonly used technique to compute intractable integrals and is typically thought to perform poorly for very high-dimensional integrals. To show that this is not always the case, we examine Monte Carlo…

Methodology · Statistics 2023-05-26 Yanbo Tang

We extend approximate next-to-next-to-leading order results for top-pair production to include the semi-leptonic decays of top quarks in the narrow-width approximation. The new hard-scattering kernels are implemented in a fully differential…

High Energy Physics - Phenomenology · Physics 2015-06-22 A. Broggio , A. S. Papanastasiou , A. Signer

Correlators describing the vulcanization transition are constructed and explored via a renormalization group approach. This approach is based on a minimal model that accounts for the thermal motion of constituents and the quenched random…

Disordered Systems and Neural Networks · Physics 2007-05-23 Weiqun Peng , Paul M. Goldbart