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We show that a mesoscale model, with a minimal number of parameters, can well describe the thermomechanical and mechanochemical behavior of homogeneous DNA at thermal equilibrium under tension and torque. We predict critical temperatures…

Biomolecules · Quantitative Biology 2015-06-22 Cristiano Nisoli , A. R. Bishop

We consider the energy difference restricted to a finite volume for certain pairs of incongruent ground states (if they exist) in the d-dimensional Edwards-Anderson (EA) Ising spin glass at zero temperature. We prove that the variance of…

Mathematical Physics · Physics 2016-05-04 L. -P. Arguin , C. M. Newman , D. L. Stein , J. Wehr

Circular double stranded DNA has different topological states which are defined by their linking numbers. Equilibrium distribution of linking numbers can be obtained by closing a linear DNA into a circle by ligase. Using Monte Carlo…

Biomolecules · Quantitative Biology 2009-05-04 Hu Chen , Yanhui Liu , Zhen Zhou , Lin Hu , Zhong-Can Ou-Yang , Jie Yan

Unbinding of a double-stranded DNA reduces to an unscreened long range interaction and maps on various problems. Heterogeneity renormalizes interaction. Renormalization is temperature dependent. At an unbinding transition it approaches…

Statistical Mechanics · Physics 2007-05-23 Mark Ya. Azbel'

We consider the antiferromagnetic Heisenberg model and the repulsive Hubbard model for a class of frustrated lattices with a completely dispersionless (flat) lowest one-particle (either one-magnon or one-electron) band. We construct exact…

Strongly Correlated Electrons · Physics 2009-02-17 O Derzhko , J Richter , A Honecker

We show how many-body ground state entanglement information may be extracted from sub-system energy measurements at zero temperature. A precise relation between entanglement and energy fluctuations is demonstrated in the weak coupling…

Quantum Physics · Physics 2009-11-11 Andrew N. Jordan , Markus Buttiker

The magnetic and structural properties of MnAs are studied with ab initio methods, and by mapping total energies onto a Heisenberg model. The stability of the different phases is found to depend mainly on the volume and on the amount of…

Materials Science · Physics 2009-11-11 Ivan Rungger , Stefano Sanvito

We study the mean field dilute model of a ferromagnet. We find and prove an expression for the free energy density at high temperature, and at temperature zero. We find the critical line of the model, separating the phase with zero…

Statistical Mechanics · Physics 2009-11-13 Luca De Sanctis , Francesco Guerra

The free energy and the specific heat of the two-dimensional Gaussian random bond Ising model on a square lattice are found with high accuracy using graph expansion method. At low temperatures the specific heat reveals a zero-temperature…

Disordered Systems and Neural Networks · Physics 2013-12-16 Olga Dimitrova

A lattice model of RNA denaturation which fully accounts for the excluded volume effects among nucleotides is proposed. A numerical study shows that interactions forming pseudoknots must be included in order to get a sharp continuous…

Soft Condensed Matter · Physics 2007-05-23 M. Baiesi , E. Orlandini , A. L. Stella

The effect of heterogeneous sequence composition on the denaturation of double stranded DNA is investigated. The resulting pair-binding energy variation is found to have a negligible effect on the critical properties of the smooth second…

Statistical Mechanics · Physics 2009-10-30 D. Cule , T. Hwa

We present a detailed formalism of the microscopic particle-rotor model for hypernuclear low-lying states based on a covariant density functional theory. In this method, the hypernuclear states are constructed by coupling a hyperon to…

Nuclear Theory · Physics 2015-04-21 H. Mei , K. Hagino , J. M. Yao , T. Motoba

The analytical zero-temperature phase diagram of the double exchange model for classical background spins as a function of the carrier density and Hund's coupling in the entire range of these parameters is presented. By constructing a…

Strongly Correlated Electrons · Physics 2007-05-23 David Pekker , Swagatam Mukhopadhyay , Nandini Trivedi , Paul M. Goldbart

The low-temperature quasi-universal behavior of amorphous solids has been attributed to the existence of spatially-localized tunneling defects found in the low-energy regions of the potential energy landscape. Computational models of…

Disordered Systems and Neural Networks · Physics 2023-01-05 Felix C. Mocanu , Ludovic Berthier , Simone Ciarella , Dmytro Khomenko , David R. Reichman , Camille Scalliet , Francesco Zamponi

The state function entropy and its quantum thermodynamical implication for two typical dissipative systems with anomalous spectral densities are studied by investigating on their low-temperature quantum behavior. In all cases it is found…

Statistical Mechanics · Physics 2015-06-03 Chun-Yang Wang , An-Qi Zhao , Xiang-Mu Kong , Jing-Dong Bao

We propose a statistical mechanics model for DNA melting in which base stacking and pairing are explicitly introduced as distinct degrees of freedom. Unlike previous approaches, this model describes thermal denaturation of DNA secondary…

Statistical Mechanics · Physics 2007-05-23 Vassili Ivanov , Yan Zeng , Giovanni Zocchi

In this article we study a simple spin model which has a non-interacting Hamiltonian but constrained dynamics. The model, which is a simplification of a purely toplogical cellular model, displays glassy behaviour, involves activated…

Disordered Systems and Neural Networks · Physics 2009-11-07 Lexie Davison , David Sherrington , Juan P. Garrahan , Arnaud Buhot

A random matrix approach to glassy physics is introduced. It leads to a class of models which exhibit both, glassy low-temperature phases, and double-- and single-well configurations in their potential energy. The distribution of parameters…

Disordered Systems and Neural Networks · Physics 2016-08-31 Reimer Kuehn , Uta Horstmann

A model with d-wave pairing symmetry is studied by employing a non-perturbative sum rule approach. At low temperature the magnitude of a normal state pseudogap shows strong $\vec{k}$ or angle dependence well fitted by $\cos 2\phi$ form.…

Strongly Correlated Electrons · Physics 2009-10-31 Bumsoo Kyung

We explore the consequences of Replica Symmetry Breaking at zero temperature. We introduce a repulsive coupling between a system and its unperturbed ground state. In the Replica Symmetry Breaking scenario a finite coupling induces a non…

Disordered Systems and Neural Networks · Physics 2013-04-30 Silvio Franz , Giorgio Parisi
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