Related papers: HOP: A New Group-Finding Algorithm for N-body Simu…
We present a new sink particle algorithm developed for the Adaptive Mesh Refinement code RAMSES. Our main addition is the use of a clump finder to identify density peaks and their associated regions (the peak patches). This allows us to…
We propose a new numerical procedure to simulate a single dark halo of any size and mass in a hierarchical framework coupling the extended Press-Schechter formalism (EPSF) to N-body simulations. The procedure consists of assigning…
Detecting communities in a network, based only on the adjacency matrix, is a problem of interest to several scientific disciplines. Recently, Zhang and Moore have introduced an algorithm in [P. Zhang and C. Moore, Proceedings of the…
Dark matter subhaloes are key for the predictions of simulations of structure formation, but their existence frequently ends prematurely due to two technical issues, namely numerical disruption in N-body simulations and halo finders failing…
We present a novel method, which we call dual minima hopping method (DMHM), that allows us to find the global minimum of the potential energy surface (PES) within density functional theory for systems where a fast but less accurate…
We present an algorithm to simulate the many-body depletion interaction between anisotropic colloids in an implicit way, integrating out the degrees of freedom of the depletants, which we treat as an ideal gas. Because the depletant…
Many standard structural quantities, such as order parameters and correlation functions, exist for common condensed matter systems, such as spherical and rod-like particles. However, these structural quantities are often insufficient for…
Clustering observations across partially exchangeable groups of data is a routine task in Bayesian nonparametrics. Previously proposed models allow for clustering across groups by sharing atoms in the group-specific mixing measures.…
This paper focuses on density-based clustering, particularly the Density Peak (DP) algorithm and the one based on density-connectivity DBSCAN; and proposes a new method which takes advantage of the individual strengths of these two methods…
This paper introduces a new paradigm of optimal path planning, i.e., passage-traversing optimal path planning (PTOPP), that optimizes paths' traversed passages for specified optimization objectives. In particular, PTOPP is utilized to find…
The problem of Group Testing is to identify defective items out of a set of objects by means of pool queries of the form "Does the pool contain at least a defective?". The aim is of course to perform detection with the fewest possible…
We present a new, simple, fast algorithm to numerically evolve disks of inelastically colliding particles surrounding a central star. Our algorithm adds negligible computational cost to the fastest existing collisionless N-body codes, and…
This work addresses approximate nearest neighbor search applied in the domain of large-scale image retrieval. Within the group testing framework we propose an efficient off-line construction of the search structures. The linear-time…
We consider the group isomorphism problem: given two finite groups G and H specified by their multiplication tables, decide if G and H are isomorphic. The n^(log n) barrier for group isomorphism has withstood all attacks --- even for the…
In this paper, we propose a novel model for high-dimensional data, called the Hybrid Orthogonal Projection and Estimation (HOPE) model, which combines a linear orthogonal projection and a finite mixture model under a unified generative…
Modeling self-gravity of collisionless fluids (e.g. ensembles of dark matter, stars, black holes, dust, planetary bodies) in simulations is challenging and requires some force softening. It is often desirable to allow softenings to evolve…
We suggest a new algorithm to estimate representations of compact Lie groups from finite samples of their orbits. Different from other reported techniques, our method allows the retrieval of the precise representation type as a direct sum…
Clustering is an essential technique for discovering patterns in data. The steady increase in amount and complexity of data over the years led to improvements and development of new clustering algorithms. However, algorithms that can…
Approximate N-body methods, such as FastPM and COLA, have been successful in modelling halo and galaxy clustering statistics, but their low resolution on small scales is a limitation for applications that require high precision. Full N-body…
We introduce a modified model of random walk, and then develop two novel clustering algorithms based on it. In the algorithms, each data point in a dataset is considered as a particle which can move at random in space according to the…