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Learning deep discrete latent presentations offers a promise of better symbolic and summarized abstractions that are more useful to subsequent downstream tasks. Inspired by the seminal Vector Quantized Variational Auto-Encoder (VQ-VAE),…

Machine Learning · Computer Science 2023-06-21 Tung-Long Vuong , Trung Le , He Zhao , Chuanxia Zheng , Mehrtash Harandi , Jianfei Cai , Dinh Phung

Masked image modeling (MIM) has demonstrated impressive results in self-supervised representation learning by recovering corrupted image patches. However, most existing studies operate on low-level image pixels, which hinders the…

Computer Vision and Pattern Recognition · Computer Science 2022-10-04 Zhiliang Peng , Li Dong , Hangbo Bao , Qixiang Ye , Furu Wei

Q-learning is widely recognized as an effective approach for synthesizing controllers to achieve specific goals. However, handling challenges posed by continuous state-action spaces remains an ongoing research focus. This paper presents a…

Systems and Control · Electrical Eng. & Systems 2024-06-07 Sadek Belamfedel Alaoui , Adnane Saoud

With the recent advances in machine learning for quantum chemistry, it is now possible to predict the chemical properties of compounds and to generate novel molecules. Existing generative models mostly use a string- or graph-based…

Biomolecules · Quantitative Biology 2020-10-14 Vitali Nesterov , Mario Wieser , Volker Roth

In this paper, we explore vector quantization for acoustic unit discovery. Leveraging unlabelled data, we aim to learn discrete representations of speech that separate phonetic content from speaker-specific details. We propose two neural…

Audio and Speech Processing · Electrical Eng. & Systems 2020-08-20 Benjamin van Niekerk , Leanne Nortje , Herman Kamper

The answers to many unsolved problems lie in the intractable chemical space of molecules and materials. Machine learning techniques are rapidly growing in popularity as a way to compress and explore chemical space efficiently. One of the…

Chemical Physics · Physics 2020-01-06 John E. Herr , Kevin Koh , Kun Yao , John Parkhill

Tokens serve as the basic units of representation in DNA language models (DNALMs), yet their design remains underexplored. Unlike natural language, DNA lacks inherent token boundaries or predefined compositional rules, making tokenization a…

Machine Learning · Computer Science 2026-04-13 Nan Huang , Xiaoxiao Zhou , Junxia Cui , Mario Tapia-Pacheco , Tiffany Amariuta , Yang Li , Jingbo Shang

Well-designed molecular representations (fingerprints) are vital to combine medical chemistry and deep learning. Whereas incorporating 3D geometry of molecules (i.e. conformations) in their representations seems beneficial, current 3D…

Machine Learning · Computer Science 2021-05-11 Ziyao Li , Shuwen Yang , Guojie Song , Lingsheng Cai

We investigate segmenting and clustering speech into low-bitrate phone-like sequences without supervision. We specifically constrain pretrained self-supervised vector-quantized (VQ) neural networks so that blocks of contiguous feature…

Computation and Language · Computer Science 2021-06-14 Herman Kamper , Benjamin van Niekerk

Automatic differentiation represents a paradigm shift in scientific programming, where evaluating both functions and their derivatives is required for most applications. By removing the need to explicitly derive expressions for gradients,…

Chemical Physics · Physics 2022-06-29 Muhammad F. Kasim , Susi Lehtola , Sam M. Vinko

Automated computational analysis of the vast chemical space is critical for numerous fields of research such as drug discovery and material science. Representation learning techniques have recently been employed with the primary objective…

Quantitative Methods · Quantitative Biology 2023-05-26 Atakan Yüksel , Erva Ulusoy , Atabey Ünlü , Tunca Doğan

In quantised autoencoders, images are usually split into local patches, each encoded by one token. This representation is redundant in the sense that the same number of tokens is spend per region, regardless of the visual information…

Computer Vision and Pattern Recognition · Computer Science 2024-08-06 Tim Elsner , Paula Usinger , Victor Czech , Gregor Kobsik , Yanjiang He , Isaak Lim , Leif Kobbelt

SMILES is a linear representation of chemical structures which encodes the connection table, and the stereochemistry of a molecule as a line of text with a grammar structure denoting atoms, bonds, rings and chains, and this information can…

Machine Learning · Computer Science 2018-12-03 Arindam Paul , Dipendra Jha , Reda Al-Bahrani , Wei-keng Liao , Alok Choudhary , Ankit Agrawal

Vision transformers have established a precedent of patchifying images into uniformly-sized chunks before processing. We hypothesize that this design choice may limit models in learning comprehensive and compositional representations from…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Neha Kalibhat , Priyatham Kattakinda , Sumit Nawathe , Arman Zarei , Nikita Seleznev , Samuel Sharpe , Senthil Kumar , Soheil Feizi

In this paper we introduce learnable lattice vector quantization and demonstrate its effectiveness for learning discrete representations. Our method, termed LL-VQ-VAE, replaces the vector quantization layer in VQ-VAE with lattice-based…

Machine Learning · Computer Science 2023-10-17 Ahmed Khalil , Robert Piechocki , Raul Santos-Rodriguez

Molecular representation learning plays an essential role in cheminformatics. Recently, language model-based approaches have gained popularity as an alternative to traditional expert-designed features to encode molecules. However, these…

Machine Learning · Computer Science 2022-04-19 Zhihui Guo , Pramod Sharma , Andy Martinez , Liang Du , Robin Abraham

Vector quantization is a technique in machine learning that discretizes continuous representations into a set of discrete vectors. It is widely employed in tokenizing data representations for large language models, diffusion models, and…

Machine Learning · Computer Science 2026-03-19 Wenhao Zhao , Qiran Zou , Rushi Shah , Yudi Wu , Zhouhan Lin , Dianbo Liu

Recent advancements in learning Discrete Representations as opposed to continuous ones have led to state of art results in tasks that involve Language, Audio and Vision. Some latent factors such as words, phonemes and shapes are better…

Machine Learning · Computer Science 2020-04-14 Iordanis Fostiropoulos

In this paper we demonstrate methods for reliable and efficient training of discrete representation using Vector-Quantized Variational Auto-Encoder models (VQ-VAEs). Discrete latent variable models have been shown to learn nontrivial…

In this work, we describe a full-stack pipeline for natural language processing on near-term quantum computers, aka QNLP. The language-modelling framework we employ is that of compositional distributional semantics (DisCoCat), which extends…

Computation and Language · Computer Science 2021-09-07 Konstantinos Meichanetzidis , Stefano Gogioso , Giovanni de Felice , Nicolò Chiappori , Alexis Toumi , Bob Coecke
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