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Related papers: scShapeBench: Discovering geometry from high dimen…

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Point cloud is a principal data structure adopted for 3D geometric information encoding. Unlike other conventional visual data, such as images and videos, these irregular points describe the complex shape features of 3D objects, which makes…

Computer Vision and Pattern Recognition · Computer Science 2020-04-21 Chaoyi Zhang , Yang Song , Lina Yao , Weidong Cai

Predicting protein complex structures is essential for protein function analysis, protein design, and drug discovery. While AI methods like AlphaFold can predict accurate structural models for many protein complexes, reliably estimating the…

Biomolecules · Quantitative Biology 2025-05-30 Pawan Neupane , Jian Liu , Jianlin Cheng

Time series data supports many domains (e.g., finance and climate science), but its rapid growth strains storage and computation. Dataset condensation can alleviate this by synthesizing a compact training set that preserves key information.…

Machine Learning · Computer Science 2026-02-10 Sijia Peng , Yun Xiong , Xi Chen , Yi Xie , Guanzhi Li , Yanwei Yu , Yangyong Zhu , Zhiqiang Shen

Single-cell RNA sequencing provides tremendous insights to understand biological systems. However, the noise from dropout can corrupt the downstream biological analysis. Hence, it is desirable to impute the dropouts accurately. In this…

Quantitative Methods · Quantitative Biology 2020-08-11 Kexin Huang

Flow cytometry (FC) is a single-cell profiling platform for measuring the phenotypes of individual cells from millions of cells in biological samples. FC employs high-throughput technologies and generates high-dimensional data, and hence…

Quantitative Methods · Quantitative Biology 2015-01-16 Ariful Azad

The popularisation of acquisition devices capable of capturing volumetric information such as LiDAR scans and depth cameras has lead to an increased interest in point clouds as an imaging modality. Due to the high amount of data needed for…

Image and Video Processing · Electrical Eng. & Systems 2022-01-19 Davi Lazzarotto , Touradj Ebrahimi

Single-cell data analysis seeks to characterize cellular heterogeneity based on high-dimensional gene expression profiles. Conventional approaches represent each cell as a vector in Euclidean space, which limits their ability to capture…

Machine Learning · Computer Science 2025-11-18 Xiang Xiang Wang , Sean Cottrell , Guo-Wei Wei

Modern high-throughput sequencing technologies have enabled us to profile multiple molecular modalities from the same single cell, providing unprecedented opportunities to assay celluar heterogeneity from multiple biological layers.…

Machine Learning · Statistics 2022-05-20 Pengcheng Zeng , Zhixiang Lin

Machine learning is increasingly targeting areas where input data cannot be accurately described by a single vector, but can be modeled instead using the more flexible concept of random vectors, namely probability measures or more simply…

Machine Learning · Statistics 2019-02-21 Gwendoline de Bie , Gabriel Peyré , Marco Cuturi

We present Strokes2Surface, an offline geometry reconstruction pipeline that recovers well-connected curve networks from imprecise 4D sketches to bridge concept design and digital modeling stages in architectural design. The input to our…

Graphics · Computer Science 2024-06-11 S. Rasoulzadeh , M. Wimmer , P. Stauss , I. Kovacic

The structural analysis of shape boundaries leads to the characterization of objects as well as to the understanding of shape properties. The literature on graphs and networks have contributed to the structural characterization of shapes…

Computer Vision and Pattern Recognition · Computer Science 2017-11-15 Gisele H. B. Miranda , Jeaneth Machicao , Odemir M. Bruno

Predictive models for student dropout, while often accurate, frequently rely on opportunistic feature sets and suffer from undocumented data leakage, limiting their explanatory power and institutional usefulness. This paper introduces a…

Computers and Society · Computer Science 2025-11-18 H. R. Paz

Unraveling the hierarchical structure-property relationships is the central challenge of materials science, necessitating the interpretation of data across vast physical scales from micro to macro. Despite the rapid integration of Large…

Digital Libraries · Computer Science 2026-03-23 Yuting Zheng , Zijian Chen , Qi Jia

In recent years, the field of single-cell data analysis has seen a marked advancement in the development of clustering methods. Despite advancements, most of these algorithms still concentrate on analyzing the provided single-cell matrix…

Machine Learning · Computer Science 2023-12-18 Dayu Hu , Ke Liang , Hao Yu , Xinwang Liu

Grain Boundaries govern many properties of polycrystalline materials, including the vast majority of engineering materials. Evolutionary algorithm can be applied to predict the grain boundary structures in different systems. However, the…

Materials Science · Physics 2017-10-04 Bingxi Li

Scientific papers use schematic diagrams to communicate methods, workflows, and system structure, yet existing scientific-figure corpora often mix them with plots, screenshots, and photographs and rarely preserve document context. We…

Information Retrieval · Computer Science 2026-05-28 Ling Yue , Tingwen Zhang , Jiaying Wang , Zhen Xu , Shaowu Pan

Many autonomous systems forecast aspects of the future in order to aid decision-making. For example, self-driving vehicles and robotic manipulation systems often forecast future object poses by first detecting and tracking objects. However,…

Computer Vision and Pattern Recognition · Computer Science 2020-11-10 Xinshuo Weng , Jianren Wang , Sergey Levine , Kris Kitani , Nicholas Rhinehart

In recent years, Convolutional Neural Networks (CNN) have proven to be efficient analysis tools for processing point clouds, e.g., for reconstruction, segmentation and classification. In this paper, we focus on the classification of edges…

Motivation: Single cell RNA sequencing (scRNA-seq) data makes studying the development of cells possible at unparalleled resolution. Given that many cellular differentiation processes are hierarchical, their scRNA-seq data is expected to be…

Quantitative Methods · Quantitative Biology 2022-04-25 Quentin Garrido , Sebastian Damrich , Alexander Jäger , Dario Cerletti , Manfred Claassen , Laurent Najman , Fred Hamprecht

The absence of a conventional association between the cell-cell cohabitation and its emergent dynamics into cliques during development has hindered our understanding of how cell populations proliferate, differentiate, and compete, i.e. the…

Machine Learning · Computer Science 2022-10-11 Baihan Lin