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The era of data deluge has sparked the interest in graph-based learning methods in a number of disciplines such as sociology, biology, neuroscience, or engineering. In this paper, we introduce a graph recurrent neural network (GRNN) for…

Machine Learning · Computer Science 2019-02-19 Vassilis N. Ioannidis , Antonio G. Marques , Georgios B. Giannakis

Although impressive results have been achieved for age progression and regression, there remain two major issues in generative adversarial networks (GANs)-based methods: 1) conditional GANs (cGANs)-based methods can learn various effects…

Computer Vision and Pattern Recognition · Computer Science 2021-02-02 Zhizhong Huang , Junping Zhang , Hongming Shan

Graph neural networks (GNNs) have shown promising performance for knowledge graph reasoning. A recent variant of GNN called progressive relational graph neural network (PRGNN), utilizes relational rules to infer missing knowledge in…

Computation and Language · Computer Science 2023-10-23 Shuhan Wu , Huaiyu Wan , Wei Chen , Yuting Wu , Junfeng Shen , Youfang Lin

Methods for time series prediction and classification of gene regulatory networks (GRNs) from gene expression data have been treated separately so far. The recent emergence of attention-based recurrent neural networks (RNN) models boosted…

Alzheimer's disease (AD) is a multifactorial neurodegenerative disorder characterized by progressive cognitive decline and widespread epigenetic dysregulation in the brain. DNA methylation, as a stable yet dynamic epigenetic modification,…

Genomics · Quantitative Biology 2026-01-05 Gang Qu , Guanghao Li , Zhongming Zhao

Age progression and regression refers to aesthetically render-ing a given face image to present effects of face aging and rejuvenation, respectively. Although numerous studies have been conducted in this topic, there are two major problems:…

Computer Vision and Pattern Recognition · Computer Science 2019-10-08 Qi Li , Yunfan Liu , Zhenan Sun

Estimating multiple attributes from a single facial image gives comprehensive descriptions on the high level semantics of the face. It is naturally regarded as a multi-task supervised learning problem with a single deep CNN, in which lower…

Computer Vision and Pattern Recognition · Computer Science 2018-10-23 Yan Zhang , Li Sun

Existing multi-relational graph neural networks use one of two strategies for identifying informative relations: either they reduce this problem to low-level weight learning, or they rely on handcrafted chains of relational dependencies,…

Machine Learning · Computer Science 2023-11-21 Francesco Ferrini , Antonio Longa , Andrea Passerini , Manfred Jaeger

Graph Convolutional Networks (GCNs), which model skeleton data as graphs, have obtained remarkable performance for skeleton-based action recognition. Particularly, the temporal dynamic of skeleton sequence conveys significant information in…

Computer Vision and Pattern Recognition · Computer Science 2020-12-17 Jianan Li , Xuemei Xie , Zhifu Zhao , Yuhan Cao , Qingzhe Pan , Guangming Shi

Automatic age estimation from real-world and unconstrained face images is rapidly gaining importance. In our proposed work, a deep CNN model that was trained on a database for face recognition task is used to estimate the age information on…

Computer Vision and Pattern Recognition · Computer Science 2017-09-07 Zakariya Qawaqneh , Arafat Abu Mallouh , Buket D. Barkana

Brain age prediction based on neuroimaging data could help characterize both the typical brain development and neuropsychiatric disorders. Pattern recognition models built upon functional connectivity (FC) measures derived from resting…

Computer Vision and Pattern Recognition · Computer Science 2018-01-15 Hongming Li , Theodore D. Satterthwaite , Yong Fan

Discovering genes with similar functions across diverse biomedical contexts poses a significant challenge in gene representation learning due to data heterogeneity. In this study, we resolve this problem by introducing a novel model called…

Machine Learning · Computer Science 2023-10-05 Tianyu Liu , Yuge Wang , Rex Ying , Hongyu Zhao

Estimating brain age (BA) from T1-weighted magnetic resonance images (MRIs) provides a powerful framework for quantifying anatomical brain aging. Whereas global BA (GBA) summarizes overall brain health, local BA (LBA) provides cortically…

\textit{Graph neural networks} (GNNs) are effective models for many dynamical systems consisting of entities and relations. Although most GNN applications assume a single type of entity and relation, many situations involve multiple types…

Machine Learning · Computer Science 2023-10-12 Ferran Alet , Erica Weng , Tomás Lozano Pérez , Leslie Pack Kaelbling

In genome-scale constraint-based metabolic models, gene deletion strategies are essential for achieving growth-coupled production, where cell growth and target metabolite synthesis occur simultaneously. Despite the inherently networked…

Quantitative Methods · Quantitative Biology 2026-04-10 Ziwei Yang , Takeyuki Tamura

Time series forecasting lies at the core of important real-world applications in many fields of science and engineering. The abundance of large time series datasets that consist of complex patterns and long-term dependencies has led to the…

Machine Learning · Computer Science 2023-12-01 Nancy Xu , Chrysoula Kosma , Michalis Vazirgiannis

Automated equipment health monitoring from streaming multisensor time-series data can be used to enable condition-based maintenance, avoid sudden catastrophic failures, and ensure high operational availability. We note that most complex…

Machine Learning · Computer Science 2020-07-01 Jyoti Narwariya , Pankaj Malhotra , Vishnu TV , Lovekesh Vig , Gautam Shroff

Graph neural network (GNN) models are increasingly being used for the classification of electroencephalography (EEG) data. However, GNN-based diagnosis of neurological disorders, such as Alzheimer's disease (AD), remains a relatively…

Neurons and Cognition · Quantitative Biology 2023-12-21 Dominik Klepl , Fei He , Min Wu , Daniel J. Blackburn , Ptolemaios G. Sarrigiannis

Predicting genetic perturbations enables the identification of potentially crucial genes prior to wet-lab experiments, significantly improving overall experimental efficiency. Since genes are the foundation of cellular life, building gene…

Quantitative Methods · Quantitative Biology 2025-05-09 Changxi Chi , Jun Xia , Jingbo Zhou , Jiabei Cheng , Chang Yu , Stan Z. Li

A Temporal Knowledge Graph (TKG) is a sequence of KGs corresponding to different timestamps. TKG reasoning aims to predict potential facts in the future given the historical KG sequences. One key of this task is to mine and understand…

Artificial Intelligence · Computer Science 2022-03-22 Zixuan Li , Saiping Guan , Xiaolong Jin , Weihua Peng , Yajuan Lyu , Yong Zhu , Long Bai , Wei Li , Jiafeng Guo , Xueqi Cheng