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Axon diameter and myelin thickness affect the conduction velocity of action potentials in the nervous system. Imaging them non-invasively with MRI-based methods is thus valuable for studying brain microstructure and function. Electron…

Pathologically altered iron levels, detected using iron-sensitive MRI techniques such as quantitative susceptibility mapping (QSM), are observed in neurological disorders such as multiple sclerosis (MS) and may play a crucial role in…

Quantitative susceptibility mapping (QSM) estimates the underlying tissue magnetic susceptibility from MRI gradient-echo phase signal and typically requires several processing steps. These steps involve phase unwrapping, brain volume…

Image and Video Processing · Electrical Eng. & Systems 2019-05-16 Hongjiang Wei , Steven Cao , Yuyao Zhang , Xiaojun Guan , Fuhua Yan , Kristen W. Yeom , Chunlei Liu

Voxel-based lesion-symptom mapping (VLSM) is an important method for basic and translational human neuroscience research. VLSM leverages modern neuroimaging analysis techniques to build on the classic approach of examining the relationship…

Purpose: Field-to-susceptibility inversion in quantitative susceptibility mapping (QSM) is ill-posed and needs numerical stabilization through either regularization or oversampling by acquiring data at three or more object orientations.…

We consider the NMR signal from a permeable medium with a heterogeneous Larmor frequency component that varies on a scale comparable to the spin-carrier diffusion length. We focus on the mesoscopic part of the transverse relaxation, that…

Mesoscale and Nanoscale Physics · Physics 2008-10-23 D. S. Novikov , V. G. Kiselev

We present a rotation-equivariant unsupervised learning framework for the sparse deconvolution of non-negative scalar fields defined on the unit sphere. Spherical signals with multiple peaks naturally arise in Diffusion MRI (dMRI), where…

Image and Video Processing · Electrical Eng. & Systems 2021-02-19 Axel Elaldi , Neel Dey , Heejong Kim , Guido Gerig

Quantitative Susceptibility Mapping (QSM) is a technique for measuring magnetic susceptibility of tissues, aiding in the detection of pathologies like traumatic brain injury and multiple sclerosis by analyzing variations in substances such…

Quantitative Methods · Quantitative Biology 2025-06-05 Liad Doniza , Mitchel Lee , Tamar Blumenfeld Katzir , Moran Artzi , Dafna Ben Bashat , Dvir Radunsky , Karin Shmueli , Noam Ben-Eliezer

We develop a semiclassical Boltzmann theory for frequency-dependent magneto-optical transport in Weyl semimetals (WSMs), incorporating momentum-dependent relaxation via a scattering matrix approach. The interplay of orbital magnetic moment,…

Mesoscale and Nanoscale Physics · Physics 2026-04-14 Azaz Ahmad , Pankaj Bhalla , Snehasish Nandy , Tanay Nag

Multi-compartment modeling of diffusion-weighted magnetic resonance imaging measurements is necessary for accurate brain connectivity analysis. Existing methods for estimating the number and orientations of fascicles in an imaging voxel…

Image and Video Processing · Electrical Eng. & Systems 2020-06-22 Davood Karimi , Lana Vasung , Camilo Jaimes , Fedel Machado-Rivas , Shadab Khan , Simon K. Warfield , Ali Gholipour

Quantitative susceptibility mapping (QSM) utilizes MRI signal phase to estimate local tissue susceptibility, which has been shown useful to provide novel image contrast and as biomarkers of abnormal tissue. QSM requires addressing a…

Medical Physics · Physics 2019-06-03 Juan Liu , Kevin M. Koch

Lesions or organ boundaries visible through medical imaging data are often ambiguous, thus resulting in significant variations in multi-reader delineations, i.e., the source of aleatoric uncertainty. In particular, quantifying the…

Computer Vision and Pattern Recognition · Computer Science 2022-01-19 Xiaofeng Liu , Fangxu Xing , Thibault Marin , Georges El Fakhri , Jonghye Woo

The dynamic magnetic susceptibility of magnetic materials near ferromagnetic resonance (FMR) is very important in interpreting dc-voltage in electrical detection of FMR. Based on the causality principle and the assumption that the usual…

Mesoscale and Nanoscale Physics · Physics 2015-12-08 Yin Zhang , X. S. Wang , H. Y. Yuan , S. S. Kang , H. W. Zhang , X. R. Wang

Larmor precession of laser-polarized atoms contained in anti-relaxation-coated cells, detected via nonlinear magneto-optical rotation (NMOR) is a promising technique for a new generation of ultra-sensitive atomic magnetometers. For magnetic…

Atomic Physics · Physics 2009-11-11 S. Pustelny , S. M. Rochester , D. F. Jackson Kimball , V. V. Yashchuk , D. Budker , W. Gawlik

Cubic chiral magnets, such as Cu$_{2}$OSeO$_{3}$, exhibit a variety of non-collinear spin textures, including a trigonal lattice of spin whirls, so-called skyrmions. Using magnetic resonant elastic x-ray scattering (REXS) on a crystalline…

Changes in the nervous system due to neurological diseases take place at very small spatial scales, on the order of the micro and nanometers. Developing non-invasive imaging methods for obtaining this microscopic information as quantitative…

Porosity variations in tubular scaffolds are critical to reproducible, sophisticated applications of electrospun fibers in biomedicine. Established laser micrometry techniques produced ~14,000 datapoints enabling thickness and porosity…

Applied Physics · Physics 2021-11-23 Y. Liu , F. J. Chaparro , Z. Gray , J. Gaumer , D. B. Cybyk , L. Ross , P. Gosser , Z. Tian , Y. Jia , T. Dull , A. L. Yarin , J. J. Lannutti

In situ NMR spectroscopy is a powerful technique to investigate charge storage mechanisms in carbon-based supercapacitors thanks to its ability to distinguish ionic and molecular species adsorbed in the porous electrodes from those in the…

Quantitative Susceptibility Mapping (QSM) quantifies tissue magnetic susceptibility from magnetic-resonance phase data and plays a crucial role in brain microstructure imaging, iron-deposition assessment, and neurological-disease research.…

Image and Video Processing · Electrical Eng. & Systems 2025-12-11 Xuan Cai , Ruo-Mi Guo , Xiao-Wen Luo , Jing Zhao , Silun Wang , Tao Tan , Yue Liu , Hongbin Han , Mengting Liu

Purpose: Diffusion weighted MRI (dMRI) and its models of neural structure provide insight into human brain organization and variations in white matter. A recent study by McMaster, et al. showed that complex graph measures of the connectome,…