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Large language models (LLMs) are increasingly touted as powerful tools for automating scientific information extraction. However, existing methods and tools often struggle with the realities of scientific literature: long-context documents,…

Scientific literature is growing exponentially, creating a critical bottleneck for researchers to efficiently synthesize knowledge. While general-purpose Large Language Models (LLMs) show potential in text processing, they often fail to…

Computation and Language · Computer Science 2025-09-11 Fengyu She , Nan Wang , Hongfei Wu , Ziyi Wan , Jingmian Wang , Chang Wang

Relation extraction is a critical task in the field of natural language processing with numerous real-world applications. Existing research primarily focuses on monolingual relation extraction or cross-lingual enhancement for relation…

Artificial Intelligence · Computer Science 2024-03-26 Lingxing Kong , Yougang Chu , Zheng Ma , Jianbing Zhang , Liang He , Jiajun Chen

Accurate parsing of citations is necessary for machine-readable scholarly infrastructure. But, despite sustained interest in this problem, existing evaluation techniques are often not generalizable, based on synthetic data, or not publicly…

Digital Libraries · Computer Science 2026-03-27 Parth Sarin , Juan Pablo Alperin , Adam Buttrick , Dione Mentis

This paper presents an empirical study to build relation extraction systems in low-resource settings. Based upon recent pre-trained language models, we comprehensively investigate three schemes to evaluate the performance in low-resource…

Computation and Language · Computer Science 2023-09-19 Xin Xu , Xiang Chen , Ningyu Zhang , Xin Xie , Xi Chen , Huajun Chen

Cross-document relation extraction (RE) aims to identify relations between the head and tail entities located in different documents. Existing approaches typically adopt the paradigm of ``\textit{Small Language Model (SLM) + Classifier}''.…

Computation and Language · Computer Science 2026-04-21 Guoqi Ma , Liang Zhang , Hongyao Tu , Hao Fu , Hui Li , Yujie Lin , Longyue Wang , Weihua Luo , Jinsong Su

Reliably extracting tables from PDFs is essential for large-scale scientific data mining and knowledge base construction, yet existing evaluation approaches rely on rule-based metrics that fail to capture semantic equivalence of table…

Computer Vision and Pattern Recognition · Computer Science 2026-03-20 Pius Horn , Janis Keuper

Unstructured documents like PDFs contain valuable structured information, but downstream systems require this data in reliable, standardized formats. LLMs are increasingly deployed to automate this extraction, making accuracy and…

Machine Learning · Computer Science 2026-02-17 Nick Ferguson , Josh Pennington , Narek Beghian , Aravind Mohan , Douwe Kiela , Sheshansh Agrawal , Thien Hang Nguyen

Extracting structured information from unstructured text is critical for many downstream NLP applications and is traditionally achieved by closed information extraction (cIE). However, existing approaches for cIE suffer from two…

Computation and Language · Computer Science 2024-04-22 Nacime Bouziani , Shubhi Tyagi , Joseph Fisher , Jens Lehmann , Andrea Pierleoni

Enterprise data pipelines, characterized by complex transformations across multiple programming languages, often cause a semantic disconnect between original metadata and downstream data. This "semantic drift" compromises data…

Computation and Language · Computer Science 2025-08-12 Jiaqi Yin , Yi-Wei Chen , Meng-Lung Lee , Xiya Liu

Objective: To develop a high-throughput biomedical relation extraction system that takes advantage of the large language models'(LLMs) reading comprehension ability and biomedical world knowledge in a scalable and evidential manner.…

Computation and Language · Computer Science 2024-03-27 Songchi Zhou , Sheng Yu

Publications are an integral part in a scientific community. Bibliographic reference extraction from scientific publication is a challenging task due to diversity in referencing styles and document layout. Existing methods perform…

Computer Vision and Pattern Recognition · Computer Science 2020-12-15 Syed Tahseen Raza Rizvi , Andreas Dengel , Sheraz Ahmed

We present LLMStructBench, a novel benchmark for evaluating Large Language Models (LLMs) on extracting structured data and generating valid JavaScript Object Notation (JSON) outputs from natural-language text. Our open dataset comprises…

Computation and Language · Computer Science 2026-02-17 Sönke Tenckhoff , Mario Koddenbrock , Erik Rodner

Extracting information from academic PDF documents is crucial for numerous indexing, retrieval, and analysis use cases. Choosing the best tool to extract specific content elements is difficult because many, technically diverse tools are…

Information Retrieval · Computer Science 2023-03-20 Norman Meuschke , Apurva Jagdale , Timo Spinde , Jelena Mitrović , Bela Gipp

Extracting information from full documents is an important problem in many domains, but most previous work focus on identifying relationships within a sentence or a paragraph. It is challenging to create a large-scale information extraction…

Computation and Language · Computer Science 2020-05-04 Sarthak Jain , Madeleine van Zuylen , Hannaneh Hajishirzi , Iz Beltagy

Large language models (LLMs) have shown potential in assisting scientific research, yet their ability to discover high-quality research hypotheses remains unexamined due to the lack of a dedicated benchmark. To address this gap, we…

Computation and Language · Computer Science 2026-04-21 Yujie Liu , Zonglin Yang , Tong Xie , Jinjie Ni , Ben Gao , Yuqiang Li , Shixiang Tang , Wanli Ouyang , Erik Cambria , Dongzhan Zhou

With the rapid development of Large Language Models (LLMs), it is crucial to have benchmarks which can evaluate the ability of LLMs on different domains. One common use of LLMs is performing tasks on scientific topics, such as writing…

Deep Research Agents increasingly automate survey generation, yet whether they match human experts at retrieving essential papers and organizing them into expert-like taxonomies remains unclear. Existing benchmarks emphasize writing quality…

The increasing volume of scholarly publications requires advanced tools for efficient knowledge discovery and management. This paper introduces ongoing work on a system using Large Language Models (LLMs) for the semantic extraction of key…

Digital Libraries · Computer Science 2025-10-07 Samy Ateia , Udo Kruschwitz , Melanie Scholz , Agnes Koschmider , Moayad Almohaishi

Constructing accurate knowledge graphs from long texts and low-resource languages is challenging, as large language models (LLMs) experience degraded performance with longer input chunks. This problem is amplified in low-resource settings…

Computation and Language · Computer Science 2025-03-25 Divyansh Singh , Manuel Nunez Martinez , Bonnie J. Dorr , Sonja Schmer Galunder
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