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Objective: Medical relations are the core components of medical knowledge graphs that are needed for healthcare artificial intelligence. However, the requirement of expert annotation by conventional algorithm development processes creates a…

Machine Learning · Computer Science 2020-09-09 Yucong Lin , Keming Lu , Yulin Chen , Chuan Hong , Sheng Yu

Sentence-by-sentence information extraction from long documents is an exhausting and error-prone task. As the indicator of document skeleton, catalogs naturally chunk documents into segments and provide informative cascade semantics, which…

Computation and Language · Computer Science 2023-05-01 Tong Zhu , Guoliang Zhang , Zechang Li , Zijian Yu , Junfei Ren , Mengsong Wu , Zhefeng Wang , Baoxing Huai , Pingfu Chao , Wenliang Chen

The increasing complexity of computer science research projects demands more effective tools for deploying code repositories. Large Language Models (LLMs), such as Anthropic Claude and Meta Llama, have demonstrated significant advancements…

Software Engineering · Computer Science 2025-02-13 Yijia Xiao , Runhui Wang , Luyang Kong , Davor Golac , Wei Wang

This paper investigates the Relation Extraction task in documents by benchmarking two different neural network models: a multi-modal language model (LayoutXLM) and a Graph Neural Network: Edge Convolution Network (ECN). For this benchmark,…

Computation and Language · Computer Science 2022-06-22 Hervé Déjean , Stéphane Clinchant , Jean-Luc Meunier

Various tasks, such as summarization, multi-hop question answering, or coreference resolution, are naturally phrased over collections of real-world documents. Such tasks present a unique set of challenges, revolving around the lack of…

Computation and Language · Computer Science 2024-06-25 Gili Lior , Avi Caciularu , Arie Cattan , Shahar Levy , Ori Shapira , Gabriel Stanovsky

Large Language Models (LLMs) offer new potential for automating documentation-to-code traceability, yet their capabilities remain underexplored. We present a comprehensive evaluation of LLMs (Claude 3.5 Sonnet, GPT-4o, and o3-mini) in…

Software Engineering · Computer Science 2025-08-08 Ebube Alor , SayedHassan Khatoonabadi , Emad Shihab

Metadata extraction is essential for cataloging and preserving datasets, enabling effective research discovery and reproducibility, especially given the current exponential growth in scientific research. While Masader (Alyafeai et al.,2021)…

Computation and Language · Computer Science 2025-09-19 Zaid Alyafeai , Maged S. Al-Shaibani , Bernard Ghanem

Thousands of new scientific papers are published each month. Such information overload complicates researcher efforts to stay current with the state-of-the-art as well as to verify and correctly attribute claims. We pose the following…

Computation and Language · Computer Science 2024-11-05 Ori Press , Andreas Hochlehnert , Ameya Prabhu , Vishaal Udandarao , Ofir Press , Matthias Bethge

Document-level RE requires reading, inferring and aggregating over multiple sentences. From our point of view, it is necessary for document-level RE to take advantage of multi-granularity inference information: entity level, sentence level…

Computation and Language · Computer Science 2020-03-31 Hengzhu Tang , Yanan Cao , Zhenyu Zhang , Jiangxia Cao , Fang Fang , Shi Wang , Pengfei Yin

Large Language Models (LLMs) have swiftly emerged as vital resources for different applications in the biomedical and healthcare domains; however, these models encounter issues such as generating inaccurate information or hallucinations.…

Computation and Language · Computer Science 2024-05-06 Mingchen Li , Halil Kilicoglu , Hua Xu , Rui Zhang

In enterprise search, building high-quality datasets at scale remains a central challenge due to the difficulty of acquiring labeled data. To resolve this challenge, we propose an efficient approach to fine-tune small language models (SLMs)…

Fully comprehending scientific papers by machines reflects a high level of Artificial General Intelligence, requiring the ability to reason across fragmented and heterogeneous sources of information, presenting a complex and practically…

Computation and Language · Computer Science 2025-06-30 Yang Tian , Zheng Lu , Mingqi Gao , Zheng Liu , Bo Zhao

Machine comprehension of texts longer than a single sentence often requires coreference resolution. However, most current reading comprehension benchmarks do not contain complex coreferential phenomena and hence fail to evaluate the ability…

Computation and Language · Computer Science 2019-09-06 Pradeep Dasigi , Nelson F. Liu , Ana Marasović , Noah A. Smith , Matt Gardner

Identifying suitable datasets for a research question remains challenging because existing dataset search engines rely heavily on metadata quality and keyword overlap, which often fail to capture the semantic intent of scientific…

Digital Libraries · Computer Science 2026-01-09 Zhiyin Tan , Changxu Duan

Rare diseases, including Inborn Errors of Metabolism (IEM), pose significant diagnostic challenges. Case reports serve as key but computationally underutilized resources to inform diagnosis. Clinical dense information extraction refers to…

Computation and Language · Computer Science 2025-05-26 Xiao Yu Cindy Zhang , Carlos R. Ferreira , Francis Rossignol , Raymond T. Ng , Wyeth Wasserman , Jian Zhu

Multimodal Large Language Models (MLLM) have made significant progress in the field of document analysis. Despite this, existing benchmarks typically focus only on extracting text and simple layout information, neglecting the complex…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Lei Chen , Feng Yan , Yujie Zhong , Shaoxiang Chen , Zequn Jie , Lin Ma

Large language models for code are advancing fast, yet our ability to evaluate them lags behind. Current benchmarks focus on narrow tasks and single metrics, which hide critical gaps in robustness, interpretability, fairness, efficiency,…

As the volume of scientific submissions continues to grow rapidly, traditional peer review systems are facing unprecedented scalability pressures, highlighting the urgent need for automated reviewing methods that are both scalable and…

Computation and Language · Computer Science 2026-02-03 Yinuo Zhang , Dingcheng Huang , Haifeng Suo , Yizhuo Li , Ziya Zhao , Junhao Xu , Zhiying Tu , Dianhui Chu , Deming Zhai , Xianming Liu , Xiaoyan Yu , Dianbo Sui

Taxonomies are hierarchical knowledge graphs crucial for recommendation systems, and web applications. As data grows, expanding taxonomies is essential, but existing methods face key challenges: (1) discriminative models struggle with…

Computation and Language · Computer Science 2025-06-03 Sahil Mishra , Kumar Arjun , Tanmoy Chakraborty

Traditionally in the domain of legal research, the retrieval of pertinent citations from intricate case descriptions has demanded manual effort and keyword-based search applications that mandate expertise in understanding legal jargon.…

Information Retrieval · Computer Science 2024-08-16 Akshat Mohan Dasula , Hrushitha Tigulla , Preethika Bhukya
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