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A blood cell lineage consists of several consecutive developmental stages from the pluri- or multipotent stem cell to a state of terminal differentiation. Despite their importance for human biology, the regulatory pathways and gene networks…

Molecular Networks · Quantitative Biology 2020-09-18 Maryam Nazarieh , Volkhard Helms , Marc P. Hoeppner , Andre Franke

Genes are often regulated in living cells by proteins called transcription factors (TFs) that bind directly to short segments of DNA in close proximity to specific genes. These binding sites have a conserved nucleotide appearance, which is…

Statistics Theory · Mathematics 2007-06-13 Shane T. Jensen , Jun S. Liu

Multi-label (ML) classification is an actively researched topic currently, which deals with convoluted and overlapping boundaries that arise due to several labels being active for a particular data instance. We propose a classifier capable…

Machine Learning · Computer Science 2021-07-22 Anwesha Law , Ashish Ghosh

Facial Attribute Classification (FAC) has attracted increasing attention in computer vision and pattern recognition. However, state-of-the-art FAC methods perform face detection/alignment and FAC independently. The inherent dependencies…

Computer Vision and Pattern Recognition · Computer Science 2020-02-11 Longbiao Mao , Yan Yan , Jing-Hao Xue , Hanzi Wang

Many real-world data, such as recommendation data and temporal graphs, can be represented as incomplete sparse tensors where most entries are unobserved. For such sparse tensors, identifying the top-k higher-order interactions that are most…

Machine Learning · Computer Science 2025-03-18 Jun-Gi Jang , Jingrui He , Andrew Margenot , Hanghang Tong

Multi-label classification (MLC) is a supervised learning problem in which, contrary to standard multiclass classification, an instance can be associated with several class labels simultaneously. In this chapter, we advocate a rule-based…

Machine Learning · Computer Science 2020-12-09 Eneldo Loza Mencía , Johannes Fürnkranz , Eyke Hüllermeier , Michael Rapp

Many modern applications deal with multi-label data, such as functional categorizations of genes, image labeling and text categorization. Classification of such data with a large number of labels and latent dependencies among them is a…

Machine Learning · Computer Science 2018-04-05 Zahra Ahmadi , Stefan Kramer

Transcription factor (TF) molecules translocate by facilitated diffusion (a combination of 3D diffusion around and 1D random walk on the DNA). Despite the attention this mechanism received in the last 40 years, only a few studies…

Subcellular Processes · Quantitative Biology 2013-09-20 Nicolae Radu Zabet , Boris Adryan

Multi-label classification is an important yet challenging task in natural language processing. It is more complex than single-label classification in that the labels tend to be correlated. Existing methods tend to ignore the correlations…

Computation and Language · Computer Science 2018-06-18 Pengcheng Yang , Xu Sun , Wei Li , Shuming Ma , Wei Wu , Houfeng Wang

Deep Learning is considered to be a quite young in the area of machine learning research, found its effectiveness in dealing complex yet high dimensional dataset that includes but limited to images, text and speech etc. with multiple levels…

Computer Vision and Pattern Recognition · Computer Science 2016-10-19 Mrutyunjaya Panda

We propose an off-line approach to explicitly encode temporal patterns spatially as different types of images, namely, Gramian Angular Fields and Markov Transition Fields. This enables the use of techniques from computer vision for feature…

Machine Learning · Computer Science 2015-09-25 Zhiguang Wang , Tim Oates

In multi-label learning, each instance is associated with multiple labels and the crucial task is how to leverage label correlations in building models. Deep neural network methods usually jointly embed the feature and label information…

Machine Learning · Computer Science 2019-11-18 Liang Yang , Xi-Zhu Wu , Yuan Jiang , Zhi-Hua Zhou

Many statistical learning models hold an assumption that the training data and the future unlabeled data are drawn from the same distribution. However, this assumption is difficult to fulfill in real-world scenarios and creates barriers in…

Human-Computer Interaction · Computer Science 2020-09-16 Yuxin Ma , Arlen Fan , Jingrui He , Arun Reddy Nelakurthi , Ross Maciejewski

Traditional methods for tabular classification usually rely on supervised learning from scratch, which requires extensive training data to determine model parameters. However, a novel approach called Prior-Data Fitted Networks (TabPFN) has…

Machine Learning · Computer Science 2024-06-12 Quangao Liu , Wei Yang , Chen Liang , Longlong Pang , Zhuozhang Zou

This paper addresses a multi-label predictive fault classification problem for multidimensional time-series data. While fault (event) detection problems have been thoroughly studied in literature, most of the state-of-the-art techniques…

Machine Learning · Computer Science 2020-01-29 Wenyu Zhang , Devesh K. Jha , Emil Laftchiev , Daniel Nikovski

Recognizing multiple labels of images is a fundamental but challenging task in computer vision, and remarkable progress has been attained by localizing semantic-aware image regions and predicting their labels with deep convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2017-12-21 Tianshui Chen , Zhouxia Wang , Guanbin Li , Liang Lin

Segmental conditional random fields (SCRFs) and connectionist temporal classification (CTC) are two sequence labeling methods used for end-to-end training of speech recognition models. Both models define a transcription probability by…

Computation and Language · Computer Science 2017-06-07 Liang Lu , Lingpeng Kong , Chris Dyer , Noah A. Smith

Deep networks trained on large-scale data can learn transferable features to promote learning multiple tasks. Since deep features eventually transition from general to specific along deep networks, a fundamental problem of multi-task…

Machine Learning · Computer Science 2017-11-07 Mingsheng Long , Zhangjie Cao , Jianmin Wang , Philip S. Yu

We propose a methodology for estimating human behaviors in psychotherapy sessions using mutli-label and multi-task learning paradigms. We discuss the problem of behavioral coding in which data of human interactions is the annotated with…

Computation and Language · Computer Science 2020-10-07 James Gibson , David C. Atkins , Torrey Creed , Zac Imel , Panayiotis Georgiou , Shrikanth Narayanan

Cross-graph Relational Learning (CGRL) refers to the problem of predicting the strengths or labels of multi-relational tuples of heterogeneous object types, through the joint inference over multiple graphs which specify the internal…

Machine Learning · Computer Science 2016-05-09 Hanxiao Liu , Yiming Yang