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Related papers: Excess Electron Localization in Solvated DNA Bases

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Manipulating energy levels while controlling the electron localization is an essential step for many applications of confined systems. In this paper we demonstrate how to achieve electron localization and induce energy level oscillation in…

Mesoscale and Nanoscale Physics · Physics 2015-05-25 Fahhad H. Alharbi , Pablo Serra , Marcelo Carignano , Sabre Kais

The study of electronic transitions within a molecule connected to the absorption or emission of light is a common task in the process of the design of new materials. The transitions are complex quantum mechanical processes and a detailed…

Human-Computer Interaction · Computer Science 2021-06-03 Talha Bin Masood , Signe Sidwall Thygesen , Mathieu Linares , Alexei I. Abrikosov , Vijay Natarajan , Ingrid Hotz

Electron scattering on unstable nuclei is planned in future facilities of the GSI and RIKEN upgrades. Motivated by this fact, we study theoretical predictions for elastic electron scattering in the N=82, N=50, and N=14 isotonic chains from…

Nuclear Theory · Physics 2013-01-10 X. Roca-Maza , M. Centelles , F. Salvat , X. Viñas

An analysis of the electron localization properties in doped graphene is performed by doing a numerical multifractal analysis. By obtaining the singularity spectrum of a tight-binding model, it is found that the electron wave functions…

Disordered Systems and Neural Networks · Physics 2013-07-01 J. E. Barrios-Vargas , Gerardo G. Naumis

A combination of Scanning Tunneling Microscopy/Spectroscopy and Density Functional Theory (DFT+U) is used to characterize excess electrons in TiO$_2$ rutile and anatase, two prototypical materials with identical chemical composition but…

The behavior of saturated aqueous sodium chloride solutions under a constant external electric field (E) was studied by molecular dynamics (MD) simulation. Our dynamic MD simulations have indicated that the irreversible nucleation process…

Soft Condensed Matter · Physics 2016-01-20 Gan Ren , Yanting Wang

The electric field dielectric polarization-based separations mechanism represents a novel method for separating solutions at small length scales. An electric field gradient with a maximum strength of $\mathrm{0.4~MV/m}$ applied across a…

Chemical Physics · Physics 2023-11-29 Gaurav Anand , Samira Safaripour , Craig Snoeyink

We propose a new method for electrophoretic separation of DNA in which adsorbed polymers are driven over a disordered two-dimensional substrate which contains attractive sites for the polymers. Using simulations of a model for long polymer…

Soft Condensed Matter · Physics 2008-03-31 C. J. Olson Reichhardt , C. Reichhardt

Elastic electromagnetic form factors of nucleons are investigated both for the time-like and the space-like momentums by using the unsubtracted dispersion relation with QCD constraints. It is shown that the calculated form factors reproduce…

High Energy Physics - Phenomenology · Physics 2010-02-02 Susumu Furuichi , Hirohisa Ishikawa , Keiji Watanbe

Multistate empirical valence bond (EVB) models provide an accurate description of the energetics of proton transfer and solvation in complex molecular systems and can be efficiently used in molecular dynamics computer simulations. Within…

Soft Condensed Matter · Physics 2007-11-06 Jürgen Köfinger , Christoph Dellago

Most applications of time-dependent density-functional theory (TDDFT) use the adiabatic local-density approximation (ALDA) for the dynamical exchange-correlation potential Vxc(r,t). An exact (i.e., nonadiabatic) extension of the…

Mesoscale and Nanoscale Physics · Physics 2015-06-25 C. A. Ullrich

Excited states of the of the double-stranded DNA model (A)$_{12}\cdot$(T)_{12} were calculated in the framework of the exciton theory. The off-diagonal elements of the exciton matrix were calculated using the transition densities and ideal…

Soft Condensed Matter · Physics 2009-11-13 Arkadiusz Czader , Eric R. Bittner

We investigate open quantum dynamics for a one-dimensional incommensurate Aubry-Andr\'{e}-Harper lattice chain, a part of which is initially filled with electrons and is further connected to dephasing probes at the filled lattice sites.…

Statistical Mechanics · Physics 2023-10-20 Bishal Ghosh , Sandipan Mohanta , Manas Kulkarni , Bijay Kumar Agarwalla

We present theoretical models for the time-dependent voltage of an electrochemical cell in response to a current step, including effects of diffuse charge (or "space charge") near the electrodes on Faradaic reaction kinetics. The full model…

Chemical Physics · Physics 2015-05-14 M. van Soestbergen , P. M. Biesheuvel , M. Z. Bazant

The elastic scattering of twisted electrons by neutral atoms is studied within the fully relativistic framework. The electron-atom interaction is taken into account in all orders, thus allowing us to explore high-order effects beyond the…

Atomic Physics · Physics 2018-09-12 V. P. Kosheleva , V. A. Zaytsev , A. Surzhykov , V. M. Shabaev , Th. Stöhlker

We present a first-principles-based many-body typical medium dynamical cluster approximation method for characterizing electron localization in disordered structures. This method applied to monolayer hexagonal boron nitride shows that the…

Disordered Systems and Neural Networks · Physics 2017-03-23 C. Ekuma , V. Dobrosavljević , D. Gunlycke

The role of defects in solids of mixed ionic-covalent bonds such as ferroelectric oxides is complex. Current understanding of defects on ferroelectric properties at the single-defect level remains mostly at the empirical level, and the…

Materials Science · Physics 2017-09-13 Shi Liu , R. E. Cohen

DNA is now firmly established as a versatile and robust platform for achieving synthetic nanostructures. While the folding of single molecules into complex structures is routinely achieved through engineering basepair sequences, much less…

Soft Condensed Matter · Physics 2025-05-15 Soumen De Karmakar , Thomas Speck

Minuscule molecular forces can transform DNA into a structure that is elongated by more than half its original length. We demonstrate that this pronounced conformational transition is of relevance to ongoing experimental and theoretical…

Materials Science · Physics 2010-07-06 Paul Maragakis , Ryan Lee Barnett , Efthimios Kaxiras , Marcus Elstner , Thomas Frauenheim

We study numerically the mechanical stability and elasticity properties of duplex DNA molecules within the frame of a network model incorporating microscopic degrees of freedom related with the arrangement of the base pairs. We pay special…

Pattern Formation and Solitons · Physics 2015-06-26 D. Hennig , J. F. R. Archilla