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Related papers: Excess Electron Localization in Solvated DNA Bases

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An extended study of scaling of the first and second kinds for inclusive electron scattering from nuclei is presented. Emphasis is placed on the transverse response in the kinematic region lying above the quasielastic peak. In particular,…

Nuclear Theory · Physics 2009-11-07 C. Maieron , T. W. Donnelly , I. Sick

Magnetic form factors corresponding to elastic electron scattering from odd-A nuclei are presented. The calculations are carried out in plane-wave Born approximation. The one-body properties are obtained in a deformed self-consistent…

The electric dipole moments of $(H_{2}O)_{n}DCl$ ($n=3-9$) clusters have been measured by the beam deflection method. Reflecting the (dynamical) charge distribution within the system, the dipole moment contributes information about the…

Atomic and Molecular Clusters · Physics 2015-02-06 Nicholas Guggemos , Petr Slavíček , Vitaly V. Kresin

We present a theoretical study of the wave packet dynamics of the H$_2^+$ molecular ion in plasmon-enhanced laser fields. Such fields may be produced, for instance, when metallic nano-structures are illuminated by a laser pulse of moderated…

Atomic Physics · Physics 2016-07-08 I. Yavuz , M. F. Ciappina , A. Chacón , Z. Altun , M. Lewenstein

The Electron Localization Function (ELF) by Becke and Edgecombe [J. Chem. Phys. {\bf 92}, 5397 (1990)] is routinely adopted as a descriptor of atomic shells and covalent bonds. Since the ELF and its related quantities find useful…

Materials Science · Physics 2018-08-29 Stefano Pittalis , Daniele Varsano , Alain Delgado , Carlo Andrea Rozzi

In gas evolving electrolysis, bubbles grow at electrodes due to a diffusive influx from oversaturation generated locally in the electrolyte by the electrode reaction. When considering electrodes of micrometer-size resembling catalytic…

Fluid Dynamics · Physics 2024-11-11 Mengyuan Huang , Chao Sun , Kerstin Eckert , Xianren Zhang , Gerd Mutschke

We study electron addition spectra of quantum dots in a broad range of electron occupancies starting from the first electron. Spectra for dots containing <200 electrons reveal a surprising feature. Electron additions are not evenly spaced…

Mesoscale and Nanoscale Physics · Physics 2009-10-30 N. B. Zhitenev , R. C. Ashoori , L. N. Pfeiffer , K. W. West

Using the method of energy-level statistics, the localization properties of electrons moving in two dimensions in the presence of a perpendicular random magnetic field and additional random disorder potentials are investigated. For this…

Mesoscale and Nanoscale Physics · Physics 2009-10-30 M. Batsch , L. Schweitzer , B. Kramer

Protonation of DNA basepairs is a reversible phenomenon which can be controlled by tuning the pH of the system. Under mild acidic conditions, the hydrogen bonding pattern of the DNA basepairs undergoes a change. We study the effect of…

Materials Science · Physics 2007-07-31 Sairam S. Mallajosyula , Swapan K Pati

A theoretical framework for evaluating the approximate energy and dynamic properties associated with the folding of DNA into nucleosomes and chromatin is presented. For this purpose experimentally determined elastic constants of linear DNA…

Biological Physics · Physics 2007-05-23 Thomas C. Bishop , Oleksandr O. Zhmudsky

The phase diagram of a water solution of DNA and oppositely charged spherical macroions is studied. DNA winds around spheres to form beads-on-a-string complexes resembling the chromatin 10 nm fiber. At small enough concentration of spheres…

Soft Condensed Matter · Physics 2009-11-07 Toan T. Nguyen , Boris I. Shklovskii

The folding of RNA and DNA strands plays crucial roles in biological systems and bionanotechnology. However, studying these processes with high-resolution numerical models is beyond current computational capabilities due to the timescales…

Soft Condensed Matter · Physics 2024-02-07 F. Tosti Guerra , E. Poppleton , P. Šulc , L. Rovigatti

The structure of DNA in the nucleosome core particle is studied using an elastic model that incorporates anisotropy in the bending energetics and twist-bend coupling. Using the experimentally determined structure of nucleosomal DNA [T.J.…

Biomolecules · Quantitative Biology 2009-11-13 Farshid Mohammad-Rafiee , Ramin Golestanian

The form of a sheath near a small electrode, with bias changing from below to above the plasma potential is studied using 2D particle-in-cell (PIC) simulations. Five cases are studied: (A) an electrode biased more than the electron…

In this paper we consider a physical system in which two DNA molecules braid about each other. The distance between the two molecular ends, on either side of the braid, is held at a distance much larger than supercoiling radius of the…

Soft Condensed Matter · Physics 2014-07-02 Dominic J. , Lee

The response of a model micro-electrochemical system to a time-dependent applied voltage is analyzed. The article begins with a fresh historical review including electrochemistry, colloidal science, and microfluidics. The model problem…

Soft Condensed Matter · Physics 2009-11-10 Martin Z. Bazant , Katsuyo Thornton , Armand Ajdari

We study the response of a model micro-electrochemical cell to a large ac voltage of frequency comparable to the inverse cell relaxation time. To bring out the basic physics, we consider the simplest possible model of a symmetric binary…

Fluid Dynamics · Physics 2013-12-12 Laurits H. Olesen , Martin Z. Bazant , Henrik Bruus

The electronic and nuclear dynamics in methanol, following 156~nm photoexcitation, are investigated by combining a detailed analysis of time-resolved photoelectron spectroscopy experiments with electronic structure calculations. The…

Emission from high-dipole moment molecules such as HCN allows determination of the density in molecular clouds, and is often considered to trace the "dense" gas available for star formation. We assess the importance of electron excitation…

Astrophysics of Galaxies · Physics 2017-08-28 Paul F. Goldsmith , Jens Kauffmann

Electric dipole moments constitute a competitive method to search for new physics, being particularly sensitive to new CP-violating phases. Given the experimental and theoretical progress in this field and more generally in particle…

High Energy Physics - Phenomenology · Physics 2015-06-12 Martin Jung