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A set $V$ is said to be separated by subsets $V_1,\ldots,V_k$ if, for every pair of distinct elements of $V$, there is a set $V_i$ that contains exactly one of them. Imposing structural constraints on the separating subsets is often…

Combinatorics · Mathematics 2024-08-06 Lyuben Lichev , Nicolás Sanhueza-Matamala

The 'separation dimension' of a graph $G$ is the smallest natural number $k$ for which the vertices of $G$ can be embedded in $\mathbb{R}^k$ such that any pair of disjoint edges in $G$ can be separated by a hyperplane normal to one of the…

Combinatorics · Mathematics 2014-07-21 Noga Alon , Manu Basavaraju , L. Sunil Chandran , Rogers Mathew , Deepak Rajendraprasad

We discuss a notion of convergence for binary trees that is based on subtree sizes. In analogy to recent developments in the theory of graphs, posets and permutations we investigate some general aspects of the topology, such as a…

Combinatorics · Mathematics 2024-02-14 Rudolf Grübel

Consider a rooted tree $T$ with leaf-set $[n]$, and with all non-leaf vertices having out-degree $2$, at least. A rooted tree $\mathcal T$ with leaf-set $S\subset [n]$ is induced by $S$ in $T$ if $\mathcal T$ is the lowest common ancestor…

Probability · Mathematics 2021-08-12 Boris Pittel

For each $\Delta>0$, we prove that there exists some $C=C(\Delta)$ for which the binomial random graph $G(n,C\log n/n)$ almost surely contains a copy of every tree with $n$ vertices and maximum degree at most $\Delta$. In doing so, we…

Combinatorics · Mathematics 2019-08-22 Richard Montgomery

A degree sequence is a sequence ${\bf s}=(N_i,i\geq 0)$ of non-negative integers satisfying $1+\sum_i iN_i=\sum_i N_i<\infty$. We are interested in the uniform distribution $\mathbb{P}_{{\bf s}}$ on rooted plane trees whose degree sequence…

Probability · Mathematics 2020-08-28 Osvaldo Angtuncio , Gerónimo Uribe Bravo

We prove tight bounds on the site percolation threshold for $k$-uniform hypergraphs of maximum degree $\Delta$ and for $k$-uniform hypergraphs of maximum degree $\Delta$ in which any pair of edges overlaps in at most $r$ vertices. The…

Probability · Mathematics 2023-09-25 Tyler Helmuth , Will Perkins , Michail Sarantis

Trees with labelled leaves and with all other vertices of degree three play an important role in systematic biology and other areas of classification. A classical combinatorial result ensures that such trees can be uniquely reconstructed…

Combinatorics · Mathematics 2017-02-01 Katharina T. Huber , Vincent Moulton , Mike Steel

An L(2, 1)-labeling of a graph is an assignment of nonnegative integers to the vertices of G such that adjacent vertices receive numbers differed by at least 2, and vertices at distance 2 are assigned distinct numbers. The L(2, 1)-labeling…

Combinatorics · Mathematics 2015-09-02 Dong Chen , Wai Chee Shiu , Qiaojun Shu , Pak Kiu Sun , Weifan Wang

Codes over trees were introduced recently to bridge graph theory and coding theory with diverse applications in computer science and beyond. A central challenge lies in determining the maximum number of labelled trees over $n$ nodes with…

Combinatorics · Mathematics 2025-04-10 Yanzhi Li , Wenjie Zhong , Tingting Chen , Xiande Zhang

A bisection of a graph is a bipartition of its vertex set in which the number of vertices in the two parts differ by at most 1, and its size is the number of edges which go across the two parts. In this paper, motivated by several questions…

Combinatorics · Mathematics 2013-05-29 Choongbum Lee , Po-Shen Loh , Benny Sudakov

Full binary trees naturally represent commutative non-associative products. There are many important examples of these products: finite-precision floating-point addition and NAND gates, among others. Balance in such a tree is highly…

Discrete Mathematics · Computer Science 2021-08-27 Laura Monroe

For a given graph G and integers b,f >= 0, let S be a subset of vertices of G of size b+1 such that the subgraph of G induced by S is connected and S can be separated from other vertices of G by removing f vertices. We prove that every…

Data Structures and Algorithms · Computer Science 2008-05-05 Fedor V. Fomin , Yngve Villanger

We introduce the problem of isolating several nodes in random recursive trees by successively removing random edges, and study the number of random cuts that are necessary for the isolation. In particular, we analyze the number of random…

Combinatorics · Mathematics 2013-05-14 Markus Kuba , Alois Panholzer

In evolutionary biology, genetic sequences carry with them a trace of the underlying tree that describes their evolution from a common ancestral sequence. The question of how many sequence sites are required to recover this evolutionary…

Populations and Evolution · Quantitative Biology 2008-06-17 Mareike Fischer , Mike Steel

We show that the expected size of the maximum agreement subtree of two $n$-leaf trees, uniformly random among all trees with the shape, is $\Theta(\sqrt{n})$. To derive the lower bound, we prove a global structural result on a decomposition…

Combinatorics · Mathematics 2018-09-13 Pratik Misra , Seth Sullivant

We find upper bounds for the degrees of vertices and Steiner points in Steiner Minimal Trees in the d-dimensional Banach spaces \ell_p^d independent of d. This is in contrast to Minimal Spanning Trees, where the maximum degree of vertices…

Metric Geometry · Mathematics 2008-03-05 K. J. Swanepoel

For an undirected tree with $n$ edges labelled by single letters, we consider its substrings, which are labels of the simple paths between pairs of nodes. We prove that there are $O(n^{1.5})$ different palindromic substrings. This solves an…

Data Structures and Algorithms · Computer Science 2020-11-30 Paweł Gawrychowski , Tomasz Kociumaka , Wojciech Rytter , Tomasz Waleń

Genomes and genes diversify during evolution; however, it is unclear to what extent genes still retain the relationship among species. Model species for molecular phylogenetic studies include yeasts and viruses whose genomes were sequenced…

Genomics · Quantitative Biology 2008-06-09 Yunfeng Shan , Xiu-Qing Li

In 2001, Koml\'os, S\'ark\"ozy and Szemer\'edi proved that, for each $\alpha>0$, there is some $c>0$ and $n_0$ such that, if $n\geq n_0$, then every $n$-vertex graph with minimum degree at least $(1/2+\alpha)n$ contains a copy of every…

Combinatorics · Mathematics 2022-02-07 Amarja Kathapurkar , Richard Montgomery