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The notion of treewidth plays an important role in theoretical and practical studies of graph problems. It has been recognized that, especially in practical environments, when computing the treewidth of a graph it is invaluable to first…

Data Structures and Algorithms · Computer Science 2015-03-19 Hans L. Bodlaender , Bart M. P. Jansen , Stefan Kratsch

In phylogenetics, evolution is traditionally represented in a tree-like manner. However, phylogenetic networks can be more appropriate for representing evolutionary events such as hybridization, horizontal gene transfer, and others. In…

Data Structures and Algorithms · Computer Science 2024-10-18 Manuel Lafond , Vincent Moulton

Treewidth is a well-known graph invariant with multiple interesting applications in combinatorics. On the practical side, many NP-complete problems are polynomial-time (sometimes even linear-time) solvable on graphs of bounded treewidth. On…

Category Theory · Mathematics 2021-05-13 Zoltan A. Kocsis , Benjamin Merlin Bumpus

We obtain structure theorems for graphs excluding a fan (a path with a universal vertex) or a dipole ($K_{2,k}$) as a topological minor. The corresponding decompositions can be computed in FPT linear time. This is motivated by the study of…

Discrete Mathematics · Computer Science 2025-02-18 Hugo Jacob , William Lochet , Christophe Paul

Parameterized algorithms are a way to solve hard problems more efficiently, given that a specific parameter of the input is small. In this paper, we apply this idea to the field of answer set programming (ASP). To this end, we propose two…

Logic in Computer Science · Computer Science 2017-02-10 Johannes Fichte , Markus Hecher , Michael Morak , Stefan Woltran

The tree-cut width of a graph is a graph parameter defined by Wollan [J. Comb. Theory, Ser. B, 110:47-66, 2015] with the help of tree-cut decompositions. In certain cases, tree-cut width appears to be more adequate than treewidth as an…

Data Structures and Algorithms · Computer Science 2018-05-16 Eunjung Kim , Sang-il Oum , Christophe Paul , Ignasi Sau , Dimitrios M. Thilikos

Treewidth is a graph parameter that plays a fundamental role in several structural and algorithmic results. We study the problem of decomposing a given graph $G$ into node-disjoint subgraphs, where each subgraph has sufficiently large…

Data Structures and Algorithms · Computer Science 2013-04-08 Chandra Chekuri , Julia Chuzhoy

We analyze a new property of directed acyclic graphs (DAGs), called layerwidth, arising from a class of DAGs proposed by Eiter and Lukasiewicz. This class of DAGs permits certain problems of structural model-based causality and explanation…

Data Structures and Algorithms · Computer Science 2012-12-12 Mark Hopkins

In $d$-Scattered Set we are given an (edge-weighted) graph and are asked to select at least $k$ vertices, so that the distance between any pair is at least $d$, thus generalizing Independent Set. We provide upper and lower bounds on the…

Computational Complexity · Computer Science 2018-11-13 Ioannis Katsikarelis , Michael Lampis , Vangelis Th. Paschos

Threshold graphs are recursive deterministic network models that have been proposed for describing certain economic and social interactions. One drawback of this graph family is that it has limited generative attachment rules. To mitigate…

Social and Information Networks · Computer Science 2018-05-24 Vida Ravanmehr , Gregory J. Puleo , Sadegh Bolouki , Olgica Milenkovic

Fixed parameter tractable (FPT) algorithms run in time f(p(x)) poly(|x|), where f is an arbitrary function of some parameter p of the input x and poly is some polynomial function. Treewidth, branchwidth, cliquewidth, NLC-width, rankwidth,…

Combinatorics · Mathematics 2018-02-20 Jakub Marecek

Phylogenetic trees are leaf-labelled trees used to model the evolution of species. In practice it is not uncommon to obtain two topologically distinct trees for the same set of species, and this motivates the use of distance measures to…

Data Structures and Algorithms · Computer Science 2026-03-24 David Mestel , Steven Chaplick , Steven Kelk , Ruben Meuwese

Phylogenetic networks are a type of directed acyclic graph that represent how a set $X$ of present-day species are descended from a common ancestor by processes of speciation and reticulate evolution. In the absence of reticulate evolution,…

Combinatorics · Mathematics 2017-08-11 Andrew Francis , Charles Semple , Mike Steel

Motivated by the role of triadic closures in social networks, and the importance of finding a maximum subgraph avoiding a fixed pattern, we introduce and initiate the parameterized study of the Strong F-closure problem, where F is a fixed…

Data Structures and Algorithms · Computer Science 2018-03-01 Petr A. Golovach , Pinar Heggernes , Athanasios L. Konstantinidis , Paloma T. Lima , Charis Papadopoulos

Sparse structures are frequently sought when pursuing tractability in optimization problems. They are exploited from both theoretical and computational perspectives to handle complex problems that become manageable when sparsity is present.…

Discrete Mathematics · Computer Science 2019-03-21 Yuri Faenza , Gonzalo Muñoz , Sebastian Pokutta

The notion of directed treewidth was introduced by Johnson, Robertson, Seymour and Thomas [Journal of Combinatorial Theory, Series B, Vol 82, 2001] as a first step towards an algorithmic metatheory for digraphs. They showed that some…

Data Structures and Algorithms · Computer Science 2015-10-09 Mateus de Oliveira Oliveira

The metric dimension has been introduced independently by Harary, Melter and Slater in 1975 to identify vertices of a graph G using its distances to a subset of vertices of G. A resolving set X of a graph G is a subset of vertices such…

Data Structures and Algorithms · Computer Science 2023-03-21 Nicolas Bousquet , Quentin Deschamps , Aline Parreau

The Edge Multicut problem is a classical cut problem where given an undirected graph $G$, a set of pairs of vertices $\mathcal{P}$, and a budget $k$, the goal is to determine if there is a set $S$ of at most $k$ edges such that for each…

Data Structures and Algorithms · Computer Science 2022-05-23 Esther Galby , Dániel Marx , Philipp Schepper , Roohani Sharma , Prafullkumar Tale

The notion of $\mathcal{H}$-treewidth, where $\mathcal{H}$ is a hereditary graph class, was recently introduced as a generalization of the treewidth of an undirected graph. Roughly speaking, a graph of $\mathcal{H}$-treewidth at most $k$…

Data Structures and Algorithms · Computer Science 2023-06-30 Bart M. P. Jansen , Jari J. H. de Kroon , Michal Wlodarczyk

A \emph{$t$-treewidth-modulator} of a graph $G$ is a set $X \subseteq V(G)$ such that the treewidth of $G-X$ is at most some constant $t-1$. In this paper, we present a novel algorithm to compute a decomposition scheme for graphs $G$ that…

Data Structures and Algorithms · Computer Science 2012-08-02 Eun Jung Kim , Alexander Langer , Christophe Paul , Felix Reidl , Peter Rossmanith , Ignasi Sau , Somnath Sikdar